Non-Coding RNA Search

Ss1.1-Pig2-38B06.5

Sequence:


               
               GTGCCTGGGCCTGACAGCTGCGCTGGCCCGAGGCTGCTTGCACTGCCACGGCAACTTCTC
AGAGAAGTTCTCCTTCTACCGCCATCACGTGAACCTCAAGTCCTGGTGGGTGGGCGACAT
CCCTGTGTCGGGTTCGCTGCTCACCGACTGGAGCCAGGACACGATGAAGGAGCTGCATCT
GGCCATCCCCGCGGAAATCACCCGGGAGAAACTGAACCAAGTGGCAAACGCCGTGTACAA
GAGAATGGATCAACTGTACCAGGGAAAGATGTATTTCCCGGGGTATTTCCCCAACGAGCT
GCGAGCTATCTTCCGGGAGCAGGTGCACCTCATCCAGAATGCCATCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCCTGGGCCTGACAGCTGCGCTGGCCCGAGGCTGCTTGCACTGCCACGGCAACTTCTC
AGAGAAGTTCTCCTTCTACCGCCATCACGTGAACCTCAAGTCCTGGTGGGTGGGCGACAT
CCCTGTGTCGGGTTCGCTGCTCACCGACTGGAGCCAGGACACGATGAAGGAGCTGCATCT
GGCCATCCCCGCGGAAATCACCCGGGAGAAACTGAACCAAGTGGCAAACGCCGTGTACAA
GAGAATGGATCAACTGTACCAGGGAAAGATGTATTTCCCGGGGTATTTCCCCAACGAGCT
GCGAGCTATCTTCCGGGAGCAGGTGCACCTCATCCAGAATGCCATCAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|37182012|gb|AAQ88809.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|37182012|gb|AAQ88809.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-200, gnl|bosTau2|chr7 (18231016-18230817)
               

               
               1-200, gnl|Hg17|chr19 (2047959-2048161)
               

               
               1-200, gnl|Mm7|chr10 (80492415-80492614)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-200, gnl|bosTau2|chr7 (18231016-18230817)
               

               
               1-200, gnl|Hg17|chr19 (2047959-2048161)
               

               
               1-200, gnl|Mm7|chr10 (80492415-80492614)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ece (0.229305)
               

               
               med (0.116252)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               med (0.116252)

	1-200, gnl\|bosTau2\|chr7 (18231016-18230817)
	1-200, gnl\|Hg17\|chr19 (2047959-2048161)
	1-200, gnl\|Mm7\|chr10 (80492415-80492614)