Ss1.1-Pig2-40G15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGCAGAAAGGTTCCGATAGGCAAGATGGTGCCCAACTGTCCCCGCGCGCTCTTTCTGCT GCTGCTTTTCCTCGCCTGCCCCGAATCGCGGGCTTCCCAGAACTGTCTCAACAAACAGCA GCTCCTCAGTGCCATCCGCCAGCTGCAGCAGCTGCTGAAGGGCCAGGAGACGCGCTTCGC TGAGGGCGTCCGCCACATGAAGAGCCGGCTGGCGGCGCTGCAAACCTCCGTGAACAGAGC GAATCCGGACACGCCCCCAGTTTCCTGCCCTGCTCTGAGCGCCCCTCCGGATGGCAGAAA GTGTGGGAGCAAGTACTTCGTGGATCACGAAGTCCATTTTACCTGCAACCCCGGCTTCCG GCTCATCGGGCCCAGCAGTCTGGCGTGTCTTCCCAATGGTACCTGGACGGGGGAGCAGCC CCGCTGCAGAGATATCAGCGAATGCTCCAGCCAGCCTTGTCAGAATGGTGGGACCTGTGT GGAAGGTGTCAACCAATACAAATGCATTTGTCCTCTGGGAAGGACTGGGAGCCGCTGTCA GCATCAGGCCCAGACTGCCGCCCCGGATGGCAGCGAGAACGGGGACCACGCTTTCAGCCG CGCACCGCGATGCGCGCAGGTAGAGCGAGCGCAGCACTGCAGCTGCGAGGCCGGATTCCA CTTGAGCGGCGCCGCCGGGGACAGCGTCTGCCAGGATGTGAACGAATGCGAGCTGTACGG GCAGGAGGGGCGACCCCGGCTCTGCATGCATGCCTGCGTGAACACCCCTGGCTCATACCG CTGTGCCTGCCCCAGTGGATACAGGACTCTGGCCGATGGGAAGAGCTGCGAGGACATCGA TGAGTGTGTGAGCCCGCAGCCCGTGTGCCCCCGGGGGACTGTGTGCAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGCAGAAAGGTTCCGATAGGCAAGATGGTGCCCAACTGTCCCCGCGCGCTCTTTCTGCT GCTGCTTTTCCTCGCCTGCCCCGAATCGCGGGCTTCCCAGAACTGTCTCAACAAACAGCA GCTCCTCAGTGCCATCCGCCAGCTGCAGCAGCTGCTGAAGGGCCAGGAGACGCGCTTCGC TGAGGGCGTCCGCCACATGAAGAGCCGGCTGGCGGCGCTGCAAACCTCCGTGAACAGAGC GAATCCGGACACGCCCCCAGTTTCCTGCCCTGCTCTGAGCGCCCCTCCGGATGGCAGAAA GTGTGGGAGCAAGTACTTCGTGGATCACGAAGTCCATTTTACCTGCAACCCCGGCTTCCG GCTCATCGGGCCCAGCAGTCTGGCGTGTCTTCCCAATGGTACCTGGACGGGGGAGCAGCC CCGCTGCAGAGATATCAGCGAATGCTCCAGCCAGCCTTGTCAGAATGGTGGGACCTGTGT GGAAGGTGTCAACCAATACAAATGCATTTGTCCTCTGGGAAGGACTGGGAGCCGCTGTCA GCATCAGGCCCAGACTGCCGCCCCGGATGGCAGCGAGAACGGGGACCACGCTTTCAGCCG CGCACCGCGATGCGCGCAGGTAGAGCGAGCGCAGCACTGCAGCTGCGAGGCCGGATTCCA CTTGAGCGGCGCCGCCGGGGACAGCGTCTGCCAGGATGTGAACGAATGCGAGCTGTACGG GCAGGAGGGGCGACCCCGGCTCTGCATGCATGCCTGCGTGAACACCCCTGGCTCATACCG CTGTGCCTGCCCCAGTGGATACAGGACTCTGGCCGATGGGAAGAGCTGCGAGGACATCGA TGAGTGTGTGAGCCCGCAGCCCGTGTGCCCCCGGGGGACTGTGTGCAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-109, gnl|bosTau2|chr11 (2088308-2088199) | |
| 1-109, gnl|Hg17|chr2 (112612439-112612547) | |
| 1-109, gnl|Mm7|chr2 (128604901-128605009) | |
| 258-434, gnl|bosTau2|chr11 (2058684-2058508) | |
| 258-434, gnl|Hg17|chr2 (112638806-112638982) | |
| 258-434, gnl|Mm7|chr2 (128621106-128621282) | |
| 695-833, gnl|bosTau2|chr6 (54286462-54286324) | |
| 695-833, gnl|canFam2|chr17 (39679405-39679514) | |
| 695-833, gnl|danRer3|chrNA (71484780-71484671) | |
| 695-833, gnl|dasNov1|scaffold_35980 (13448-13351) | |
| 695-833, gnl|echTel1|scaffold_288028 (47763-47872) | |
| 695-833, gnl|fr1|chrUn (25230837-25230946) | |
| 695-833, gnl|galGal2|chr3 (3126540-3126649) | |
| 695-833, gnl|hg17|chr2 (112656597-112656706) | |
| 695-833, gnl|Hg17|chr2 (112656598-112656736) | |
| 695-833, gnl|loxAfr1|scaffold_225308 (699-799) | |
| 695-833, gnl|mm7|chr2 (128634618-128634727) | |
| 695-833, gnl|Mm7|chr2 (128634619-128634757) | |
| 695-833, gnl|monDom2|scaffold_1 (63526627-63526518) | |
| 695-833, gnl|oryCun1|scaffold_181108 (3376-3267) | |
| 695-833, gnl|panTro1|chr12 (115786070-115786179) | |
| 695-833, gnl|rheMac2|chr13 (111597329-111597438) | |
| 695-833, gnl|rn3|chr3 (116417663-116417772) | |
| 695-833, gnl|tetNig1|chr17 (3238187-3238078) | |
| 695-833, gnl|xenTro1|scaffold_658 (290036-289927) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-109, gnl|bosTau2|chr11 (2088308-2088199) | |
| 1-109, gnl|Hg17|chr2 (112612439-112612547) | |
| 1-109, gnl|Mm7|chr2 (128604901-128605009) | |
| 258-434, gnl|bosTau2|chr11 (2058684-2058508) | |
| 258-434, gnl|Hg17|chr2 (112638806-112638982) | |
| 258-434, gnl|Mm7|chr2 (128621106-128621282) | |
| 695-833, gnl|bosTau2|chr6 (54286462-54286324) | |
| 695-833, gnl|canFam2|chr17 (39679405-39679514) | |
| 695-833, gnl|danRer3|chrNA (71484780-71484671) | |
| 695-833, gnl|dasNov1|scaffold_35980 (13448-13351) | |
| 695-833, gnl|echTel1|scaffold_288028 (47763-47872) | |
| 695-833, gnl|fr1|chrUn (25230837-25230946) | |
| 695-833, gnl|galGal2|chr3 (3126540-3126649) | |
| 695-833, gnl|hg17|chr2 (112656597-112656706) | |
| 695-833, gnl|Hg17|chr2 (112656598-112656736) | |
| 695-833, gnl|loxAfr1|scaffold_225308 (699-799) | |
| 695-833, gnl|mm7|chr2 (128634618-128634727) | |
| 695-833, gnl|Mm7|chr2 (128634619-128634757) | |
| 695-833, gnl|monDom2|scaffold_1 (63526627-63526518) | |
| 695-833, gnl|oryCun1|scaffold_181108 (3376-3267) | |
| 695-833, gnl|panTro1|chr12 (115786070-115786179) | |
| 695-833, gnl|rheMac2|chr13 (111597329-111597438) | |
| 695-833, gnl|rn3|chr3 (116417663-116417772) | |
| 695-833, gnl|tetNig1|chr17 (3238187-3238078) | |
| 695-833, gnl|xenTro1|scaffold_658 (290036-289927) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| amn (0.835422) | |
| clu (0.119646) |