Non-Coding RNA Search

Ss1.1-Pig2-40I02.5

Sequence:


               
               ACATGCAATACTTTTATTTTAGACATGCAAAGAAAGCTCTTTCAGAATCTACTACTTTAA
AGCAAGAAGCTGTATACAGATAACAAAAGAAGCAACATCTTGTTACAGCTAGCACACGGC
ATTCAAAGCAAACAGGCATGAGACAATGCATATTTATGCAGCATTAAAACCAGATGAATG
ACATGTTGTAGGGCTGGGGGAGGAACAGAGGGAAAAAAATGGAAATGAAAGACCAATCTA
TGTTTCCCAATGCTTTCAATGTATAATGCTGCTAAATTTCTCATTTAATAGCCCATCTAG
ATGCTTCGAAATGTAATACAGTGGGAATGGTAAGAACAGAAATAACTAATTTGCATACCT
GCCTAATACACACTTTCACAGGTCTTCTTTCAGTGTCAAATCAGTCTGAGCATCTTTTGA
ATTTATTGTTTAGTGATACCTTACTTAACTCAGGCTTTAAACTCTCTAGATATAAACAAT
GAATTATTTGGTAATTTCCTCTTTATAATAAAATGCTCCATGTTTTATTAAAAATATACA
CAAAAATGATCAATAGTAAAGGTTTTCATATTCATAAATATAAAACCATATTTAACAAAT
CATTATCTAAATGGAGCCTTAATTATAAAACCATAACTAGTAAAATATTAGTACTTAAAC
AATATTAGAATTTTAACTATATAAAATACACTCCATATTAATACTTTGAAAGGGTTGCTT
ACTACTGAACAATGCTACAGGAGAGATTTTTCTGACATAGCTTTCTGATAGATCTTAAAG
GGATTGTTTGATATCACTGTATAGCACAAATGTGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACATGCAATACTTTTATTTTAGACATGCAAAGAAAGCTCTTTCAGAATCTACTACTTTAA
AGCAAGAAGCTGTATACAGATAACAAAAGAAGCAACATCTTGTTACAGCTAGCACACGGC
ATTCAAAGCAAACAGGCATGAGACAATGCATATTTATGCAGCATTAAAACCAGATGAATG
ACATGTTGTAGGGCTGGGGGAGGAACAGAGGGAAAAAAATGGAAATGAAAGACCAATCTA
TGTTTCCCAATGCTTTCAATGTATAATGCTGCTAAATTTCTCATTTAATAGCCCATCTAG
ATGCTTCGAAATGTAATACAGTGGGAATGGTAAGAACAGAAATAACTAATTTGCATACCT
GCCTAATACACACTTTCACAGGTCTTCTTTCAGTGTCAAATCAGTCTGAGCATCTTTTGA
ATTTATTGTTTAGTGATACCTTACTTAACTCAGGCTTTAAACTCTCTAGATATAAACAAT
GAATTATTTGGTAATTTCCTCTTTATAATAAAATGCTCCATGTTTTATTAAAAATATACA
CAAAAATGATCAATAGTAAAGGTTTTCATATTCATAAATATAAAACCATATTTAACAAAT
CATTATCTAAATGGAGCCTTAATTATAAAACCATAACTAGTAAAATATTAGTACTTAAAC
AATATTAGAATTTTAACTATATAAAATACACTCCATATTAATACTTTGAAAGGGTTGCTT
ACTACTGAACAATGCTACAGGAGAGATTTTTCTGACATAGCTTTCTGATAGATCTTAAAG
GGATTGTTTGATATCACTGTATAGCACAAATGTGAT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-811, gnl|bosTau2|chrX (39911703-39912491)
               

               
               1-811, gnl|Hg17|chrX (15607840-15608679)
               

               
               1-811, gnl|Mm7|chrX (158703907-158703033)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-811, gnl|bosTau2|chrX (39911703-39912491)
               

               
               1-811, gnl|Hg17|chrX (15607840-15608679)
               

               
               1-811, gnl|Mm7|chrX (158703907-158703033)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ret (0.257467)
               

               
               lin (0.145603)
               

               
               tra (0.123092)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.257467)
               

               
               lin (0.145603)
               

               
               tra (0.123092)

	1-811, gnl\|bosTau2\|chrX (39911703-39912491)
	1-811, gnl\|Hg17\|chrX (15607840-15608679)
	1-811, gnl\|Mm7\|chrX (158703907-158703033)