Non-Coding RNA Search

Ss1.1-Pig2-40I03.5

Sequence:


               
               CCCCAAAGATGATAAACAGGCCCAGACAATCCTCTCCTATCAAGCTGCAGAATTCTTCCA
GCTTATCAAACCTACTTGTCTTGCTGGAAGGCTCTTCTGCCCTGGCCTCTGGAGTGGAGA
GGTCACAAGGCTTAGATTCCAGAGGAAGAGATGACATTTGCAGAGTCTGTACTGCCAGCT
GAAGCCTTATCTGTTTATCGGGTCCCCAAAAGGTCCAAATCCAGTCTGCTCCAAACAGTA
AGGCTTGGTGTTTGGTCATCTTGGTGGTGGTGAGCCACTTGTCAACTCCTTTTTCTTGGC
AGAAAGTGACGAAGTGGATTAAGAAGATCTCATTGAGAGTGTTGGGAGCTGGGCAGAGAT
GGCTCAGAGTGTCTTCAAATCCAAGATATTCCTTCAGTTTCTGAGCGGCGTGGACCATAG
CCCCACTGACCACCTCGCTGATGCTGATAACCTCTTCACTGTCCTGTAGAGCCAACTGCT
GCGATGGTTTTTGCCCCATTTTCCCTGCACCCACTCAACGTGACTTCAGAATATCAAACA
TGTCAACTGTTCTTTCTCGGAGTAAGAGTTCTGTGGCTCCTGTGTCACGACAACTTTAGA
CGAGGCACAGATCGCCCGCTCTCCACTTCCACCTCTAAGTGAGAAGCTGGAACAACACAC
AATCTACAAGCTGTGGCTTGTGGTAGATACTGTGAGTATCTGAGAAAGAATGTGGAGCAA
AGACGCAGGGCTCGCCTTGCGTGTCCCCGCGCCCCAGTCAGACGTTTGAGTCCTCATCGG
TCATGCTGGCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCCAAAGATGATAAACAGGCCCAGACAATCCTCTCCTATCAAGCTGCAGAATTCTTCCA
GCTTATCAAACCTACTTGTCTTGCTGGAAGGCTCTTCTGCCCTGGCCTCTGGAGTGGAGA
GGTCACAAGGCTTAGATTCCAGAGGAAGAGATGACATTTGCAGAGTCTGTACTGCCAGCT
GAAGCCTTATCTGTTTATCGGGTCCCCAAAAGGTCCAAATCCAGTCTGCTCCAAACAGTA
AGGCTTGGTGTTTGGTCATCTTGGTGGTGGTGAGCCACTTGTCAACTCCTTTTTCTTGGC
AGAAAGTGACGAAGTGGATTAAGAAGATCTCATTGAGAGTGTTGGGAGCTGGGCAGAGAT
GGCTCAGAGTGTCTTCAAATCCAAGATATTCCTTCAGTTTCTGAGCGGCGTGGACCATAG
CCCCACTGACCACCTCGCTGATGCTGATAACCTCTTCACTGTCCTGTAGAGCCAACTGCT
GCGATGGTTTTTGCCCCATTTTCCCTGCACCCACTCAACGTGACTTCAGAATATCAAACA
TGTCAACTGTTCTTTCTCGGAGTAAGAGTTCTGTGGCTCCTGTGTCACGACAACTTTAGA
CGAGGCACAGATCGCCCGCTCTCCACTTCCACCTCTAAGTGAGAAGCTGGAACAACACAC
AATCTACAAGCTGTGGCTTGTGGTAGATACTGTGAGTATCTGAGAAAGAATGTGGAGCAA
AGACGCAGGGCTCGCCTTGCGTGTCCCCGCGCCCCAGTCAGACGTTTGAGTCCTCATCGG
TCATGCTGGCGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|41202064|ref|XP_370686.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|41202064|ref|XP_370686.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-573, gnl|bosTau2|chr17 (24177475-24176915)
               

               
               3-573, gnl|Hg17|chr12 (27741262-27740692)
               

               
               3-573, gnl|Mm7|chr6 (147111465-147110901)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-573, gnl|bosTau2|chr17 (24177475-24176915)
               

               
               3-573, gnl|Hg17|chr12 (27741262-27740692)
               

               
               3-573, gnl|Mm7|chr6 (147111465-147110901)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cst (0.280073)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cst (0.280073)

	3-573, gnl\|bosTau2\|chr17 (24177475-24176915)
	3-573, gnl\|Hg17\|chr12 (27741262-27740692)
	3-573, gnl\|Mm7\|chr6 (147111465-147110901)