Ss1.1-Pig2-40P09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGGAGCAGCGTTTCATCAAGGTGCAGCAGGAGCGGGATGAGCTGTACCGGAAGTTCACC GCCGCCATCCTGGAGGTGCAGCAGAAGACAGGCTTCAAAAACCTTGTCTTGGAGCGCAAG GTGCAGGCGCTGAGTGCTGCCGTGGAGCAGAAGGAGGTGCAGTTCAGTGAGGTGCTGGCA GCCTCCAACCTGGACCCCTCGGCTCTGACCCTCGTGTCCCGCAAGCTGGAGGTAGGCCCC GAGGCGAAGAACAGCACCATCCAGGACTTACAGTACGAGCTGGCGCGCGTCTGCAAGGCC CACAACGACCTGCTGCGTACCTACGAGGCGAAGCTGCTGGCCTTCGGGGTCCCCCTGGAC AATGTGGGCTTCAAGCCCCTGGAGACGGCGGTGGTTGGACAGACGCTGGGCCAAGGCCCC GCGGGACTGGTGGGCACTCCGACGTAGCCCCTGCCTGGGCCCCCCCCGGATGCCTCCCCC ACACACCAAGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGGAGCAGCGTTTCATCAAGGTGCAGCAGGAGCGGGATGAGCTGTACCGGAAGTTCACC GCCGCCATCCTGGAGGTGCAGCAGAAGACAGGCTTCAAAAACCTTGTCTTGGAGCGCAAG GTGCAGGCGCTGAGTGCTGCCGTGGAGCAGAAGGAGGTGCAGTTCAGTGAGGTGCTGGCA GCCTCCAACCTGGACCCCTCGGCTCTGACCCTCGTGTCCCGCAAGCTGGAGGTAGGCCCC GAGGCGAAGAACAGCACCATCCAGGACTTACAGTACGAGCTGGCGCGCGTCTGCAAGGCC CACAACGACCTGCTGCGTACCTACGAGGCGAAGCTGCTGGCCTTCGGGGTCCCCCTGGAC AATGTGGGCTTCAAGCCCCTGGAGACGGCGGTGGTTGGACAGACGCTGGGCCAAGGCCCC GCGGGACTGGTGGGCACTCCGACGTAGCCCCTGCCTGGGCCCCCCCCGGATGCCTCCCCC ACACACCAAGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 20-244, gnl|bosTau2|chr18 (16014871-16015095) | |
| 20-244, gnl|canFam2|chr5 (66592154-66591965) | |
| 20-244, gnl|danRer3|chr18 (29405775-29405588) | |
| 20-244, gnl|echTel1|scaffold_254052 (9329-9143) | |
| 20-244, gnl|fr1|chrUn (145624334-145624493) | |
| 20-244, gnl|galGal2|chr11_random (57747-57933) | |
| 20-244, gnl|hg17|chr16 (88634200-88634392) | |
| 20-244, gnl|Hg17|chr16 (88634207-88634430) | |
| 20-244, gnl|loxAfr1|scaffold_32008 (14891-15081) | |
| 20-244, gnl|mm7|chr8 (122170957-122171150) | |
| 20-244, gnl|Mm7|chr8 (122170965-122171192) | |
| 20-244, gnl|monDom2|scaffold_23 (5630016-5629820) | |
| 20-244, gnl|oryCun1|scaffold_173248 (42850-43042) | |
| 20-244, gnl|panTro1|chr18 (83676728-83676920) | |
| 20-244, gnl|rheMac2|chr20 (88175888-88176080) | |
| 20-244, gnl|rn3|chr19 (53856968-53857157) | |
| 20-244, gnl|tetNig1|chrUn_random (84206553-84206361) | |
| 20-244, gnl|xenTro1|scaffold_13 (3002167-3002358) | |
| 291-459, gnl|bosTau2|chr18 (16018035-16018202) | |
| 291-459, gnl|canFam2|chr5 (66587477-66587320) | |
| 291-459, gnl|danRer3|chr18 (29402838-29402711) | |
| 291-459, gnl|echTel1|scaffold_254052 (6928-6772) | |
| 291-459, gnl|galGal2|chr11_random (59748-59905) | |
| 291-459, gnl|hg17|chr16 (88637097-88637254) | |
| 291-459, gnl|Hg17|chr16 (88637099-88637306) | |
| 291-459, gnl|loxAfr1|scaffold_32008 (17623-17779) | |
| 291-459, gnl|mm7|chr8 (122176586-122176743) | |
| 291-459, gnl|Mm7|chr8 (122176588-122176789) | |
| 291-459, gnl|monDom2|scaffold_23 (5624731-5624574) | |
| 291-459, gnl|oryCun1|scaffold_152025 (1937-2094) | |
| 291-459, gnl|panTro1|chr18 (83683183-83683340) | |
| 291-459, gnl|rheMac2|chr20 (88182514-88182671) | |
| 291-459, gnl|xenTro1|scaffold_13 (3004065-3004215) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 20-244, gnl|bosTau2|chr18 (16014871-16015095) | |
| 20-244, gnl|canFam2|chr5 (66592154-66591965) | |
| 20-244, gnl|danRer3|chr18 (29405775-29405588) | |
| 20-244, gnl|echTel1|scaffold_254052 (9329-9143) | |
| 20-244, gnl|fr1|chrUn (145624334-145624493) | |
| 20-244, gnl|galGal2|chr11_random (57747-57933) | |
| 20-244, gnl|hg17|chr16 (88634200-88634392) | |
| 20-244, gnl|Hg17|chr16 (88634207-88634430) | |
| 20-244, gnl|loxAfr1|scaffold_32008 (14891-15081) | |
| 20-244, gnl|mm7|chr8 (122170957-122171150) | |
| 20-244, gnl|Mm7|chr8 (122170965-122171192) | |
| 20-244, gnl|monDom2|scaffold_23 (5630016-5629820) | |
| 20-244, gnl|oryCun1|scaffold_173248 (42850-43042) | |
| 20-244, gnl|panTro1|chr18 (83676728-83676920) | |
| 20-244, gnl|rheMac2|chr20 (88175888-88176080) | |
| 20-244, gnl|rn3|chr19 (53856968-53857157) | |
| 20-244, gnl|tetNig1|chrUn_random (84206553-84206361) | |
| 20-244, gnl|xenTro1|scaffold_13 (3002167-3002358) | |
| 291-459, gnl|bosTau2|chr18 (16018035-16018202) | |
| 291-459, gnl|canFam2|chr5 (66587477-66587320) | |
| 291-459, gnl|danRer3|chr18 (29402838-29402711) | |
| 291-459, gnl|echTel1|scaffold_254052 (6928-6772) | |
| 291-459, gnl|galGal2|chr11_random (59748-59905) | |
| 291-459, gnl|hg17|chr16 (88637097-88637254) | |
| 291-459, gnl|Hg17|chr16 (88637099-88637306) | |
| 291-459, gnl|loxAfr1|scaffold_32008 (17623-17779) | |
| 291-459, gnl|mm7|chr8 (122176586-122176743) | |
| 291-459, gnl|Mm7|chr8 (122176588-122176789) | |
| 291-459, gnl|monDom2|scaffold_23 (5624731-5624574) | |
| 291-459, gnl|oryCun1|scaffold_152025 (1937-2094) | |
| 291-459, gnl|panTro1|chr18 (83683183-83683340) | |
| 291-459, gnl|rheMac2|chr20 (88182514-88182671) | |
| 291-459, gnl|xenTro1|scaffold_13 (3004065-3004215) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nmm (0.265604) |