Ss1.1-Pig2-41A03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGAAAACCAAATAACGCCTATTATTTCATAGGATTCTTAGGTGATGAGCTCATTTTCCT GGACCCTCACACAACCCAGACCTTTGTGGACACTGAAGAGAATGGAATGGTTGACGACCA GACTTTCCACTGTCTGCAGCCCCCCCAGCGAATGAACATCCTGAACTTGGATCCTTCAGT GGCATTGGGATTTTTCTGCCAAGAAGAAAAAGACTTTGATAGCTGGTGTAGCCTTGTTCA GAAGGAAATTCTAAAGGAAAATTTAAGGATGTTTGAATTAGTTCAGAAACATCCACCGCA CTGGCCTCCCTTTGTTCCTCCAGCCAAGCCAGAAGTGACAACCACTGGGGCAGAATTCAT TGACTCTACTGAACACCTAGAGGAGTTTGACCTGGAGGAAGATTTCGAGATTCTGAGCAT ATAGAATAGTGGGAACTCAACTGGGAGATCTGTCTTCCGTCTGGCAACAGAAGAACATGA GCTCATCACATAAAACTCTTCTAGTCAGCAAGTGCCTGATATGCCAACAGCATACGAACT TGATAGCAATCATGACTGAGCCAATCACCGTTTCTCAGAAAAAAACAAACAAATGAACAA TAACACCCTCCCCCCCCCCCCCGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGAAAACCAAATAACGCCTATTATTTCATAGGATTCTTAGGTGATGAGCTCATTTTCCT GGACCCTCACACAACCCAGACCTTTGTGGACACTGAAGAGAATGGAATGGTTGACGACCA GACTTTCCACTGTCTGCAGCCCCCCCAGCGAATGAACATCCTGAACTTGGATCCTTCAGT GGCATTGGGATTTTTCTGCCAAGAAGAAAAAGACTTTGATAGCTGGTGTAGCCTTGTTCA GAAGGAAATTCTAAAGGAAAATTTAAGGATGTTTGAATTAGTTCAGAAACATCCACCGCA CTGGCCTCCCTTTGTTCCTCCAGCCAAGCCAGAAGTGACAACCACTGGGGCAGAATTCAT TGACTCTACTGAACACCTAGAGGAGTTTGACCTGGAGGAAGATTTCGAGATTCTGAGCAT ATAGAATAGTGGGAACTCAACTGGGAGATCTGTCTTCCGTCTGGCAACAGAAGAACATGA GCTCATCACATAAAACTCTTCTAGTCAGCAAGTGCCTGATATGCCAACAGCATACGAACT TGATAGCAATCATGACTGAGCCAATCACCGTTTCTCAGAAAAAAACAAACAAATGAACAA TAACACCCTCCCCCCCCCCCCCGA |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 40-188, gnl|bosTau2|chrX (17658607-17658755) | |
| 40-188, gnl|canFam2|chrX (84752995-84753111) | |
| 40-188, gnl|danRer3|chr21 (39253512-39253396) | |
| 40-188, gnl|dasNov1|scaffold_4416 (46966-47082) | |
| 40-188, gnl|echTel1|scaffold_144981 (171-283) | |
| 40-188, gnl|fr1|chrUn (247393594-247393478) | |
| 40-188, gnl|galGal2|chr4 (13852425-13852309) | |
| 40-188, gnl|hg17|chrX (107199525-107199641) | |
| 40-188, gnl|Hg17|chrX (107199525-107199673) | |
| 40-188, gnl|loxAfr1|scaffold_85 (43035-43151) | |
| 40-188, gnl|mm7|chrX (135823042-135823158) | |
| 40-188, gnl|Mm7|chrX (135823042-135823190) | |
| 40-188, gnl|monDom2|scaffold_131 (1968744-1968623) | |
| 40-188, gnl|oryCun1|scaffold_198946 (39545-39661) | |
| 40-188, gnl|panTro1|chrX (110795616-110795732) | |
| 40-188, gnl|rheMac2|chrX (106876489-106876605) | |
| 40-188, gnl|rn3|chr9 (93263945-93264060) | |
| 40-188, gnl|tetNig1|chrUn_random (88734088-88734204) | |
| 352-620, gnl|bosTau2|chrX (17672819-17673089) | |
| 352-620, gnl|canFam2|chrX (84756917-84757178) | |
| 352-620, gnl|canFam2|chrX (84756954-84757597) | |
| 352-620, gnl|dasNov1|scaffold_4416 (50895-51155) | |
| 352-620, gnl|dasNov1|scaffold_4416 (50933-51579) | |
| 352-620, gnl|echTel1|scaffold_289160 (43232-42967) | |
| 352-620, gnl|echTel1|scaffold_289160 (43193-42537) | |
| 352-620, gnl|galGal2|chr4 (13850299-13850048) | |
| 352-620, gnl|hg17|chrX (107202980-107203244) | |
| 352-620, gnl|hg17|chrX (82060342-82061000) | |
| 352-620, gnl|Hg17|chrX (107203015-107203283) | |
| 352-620, gnl|loxAfr1|scaffold_85 (46943-47203) | |
| 352-620, gnl|loxAfr1|scaffold_85 (46974-47635) | |
| 352-620, gnl|mm7|chr3 (103438893-103438265) | |
| 352-620, gnl|mm7|chrX (135827528-135827774) | |
| 352-620, gnl|Mm7|chrX (135827556-135827814) | |
| 352-620, gnl|monDom2|scaffold_131 (1962562-1962339) | |
| 352-620, gnl|oryCun1|scaffold_198946 (42788-43051) | |
| 352-620, gnl|oryCun1|scaffold_198946 (42826-43486) | |
| 352-620, gnl|panTro1|chrX (110799326-110799590) | |
| 352-620, gnl|panTro1|chrX (84615054-84615718) | |
| 352-620, gnl|rheMac2|chrX (106880250-106880512) | |
| 352-620, gnl|rheMac2|chrX (81764639-81765308) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 40-188, gnl|bosTau2|chrX (17658607-17658755) | |
| 40-188, gnl|canFam2|chrX (84752995-84753111) | |
| 40-188, gnl|danRer3|chr21 (39253512-39253396) | |
| 40-188, gnl|dasNov1|scaffold_4416 (46966-47082) | |
| 40-188, gnl|echTel1|scaffold_144981 (171-283) | |
| 40-188, gnl|fr1|chrUn (247393594-247393478) | |
| 40-188, gnl|galGal2|chr4 (13852425-13852309) | |
| 40-188, gnl|hg17|chrX (107199525-107199641) | |
| 40-188, gnl|Hg17|chrX (107199525-107199673) | |
| 40-188, gnl|loxAfr1|scaffold_85 (43035-43151) | |
| 40-188, gnl|mm7|chrX (135823042-135823158) | |
| 40-188, gnl|Mm7|chrX (135823042-135823190) | |
| 40-188, gnl|monDom2|scaffold_131 (1968744-1968623) | |
| 40-188, gnl|oryCun1|scaffold_198946 (39545-39661) | |
| 40-188, gnl|panTro1|chrX (110795616-110795732) | |
| 40-188, gnl|rheMac2|chrX (106876489-106876605) | |
| 40-188, gnl|rn3|chr9 (93263945-93264060) | |
| 40-188, gnl|tetNig1|chrUn_random (88734088-88734204) | |
| 352-620, gnl|bosTau2|chrX (17672819-17673089) | |
| 352-620, gnl|canFam2|chrX (84756917-84757178) | |
| 352-620, gnl|canFam2|chrX (84756954-84757597) | |
| 352-620, gnl|dasNov1|scaffold_4416 (50895-51155) | |
| 352-620, gnl|dasNov1|scaffold_4416 (50933-51579) | |
| 352-620, gnl|echTel1|scaffold_289160 (43232-42967) | |
| 352-620, gnl|echTel1|scaffold_289160 (43193-42537) | |
| 352-620, gnl|galGal2|chr4 (13850299-13850048) | |
| 352-620, gnl|hg17|chrX (107202980-107203244) | |
| 352-620, gnl|hg17|chrX (82060342-82061000) | |
| 352-620, gnl|Hg17|chrX (107203015-107203283) | |
| 352-620, gnl|loxAfr1|scaffold_85 (46943-47203) | |
| 352-620, gnl|loxAfr1|scaffold_85 (46974-47635) | |
| 352-620, gnl|mm7|chr3 (103438893-103438265) | |
| 352-620, gnl|mm7|chrX (135827528-135827774) | |
| 352-620, gnl|Mm7|chrX (135827556-135827814) | |
| 352-620, gnl|monDom2|scaffold_131 (1962562-1962339) | |
| 352-620, gnl|oryCun1|scaffold_198946 (42788-43051) | |
| 352-620, gnl|oryCun1|scaffold_198946 (42826-43486) | |
| 352-620, gnl|panTro1|chrX (110799326-110799590) | |
| 352-620, gnl|panTro1|chrX (84615054-84615718) | |
| 352-620, gnl|rheMac2|chrX (106880250-106880512) | |
| 352-620, gnl|rheMac2|chrX (81764639-81765308) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| mas (0.210305) | |
| pty (0.142714) | |
| lnt (0.142308) | |
| lyg (0.133103) | |
| cov (0.132153) | |
| ret (0.128733) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mas (0.210305) | |
| pty (0.142714) | |
| lnt (0.142308) | |
| lyg (0.133103) | |
| cov (0.132153) | |
| ret (0.128733) |