Non-Coding RNA Search

Ss1.1-Pig2-41C12.5

Sequence:


               
               GGAGGAGGCACAGACATGAGGTCTTTCCCGCCCCCCCCTCGCTGTGTCCTCTGCTCTGGG
CTTTCCCTCTTCCTCGGTTTCTTTCTGACCTTTTTCCGCCGTCGCTTCCCGATGCCCCTC
GTTGCTGGTGCTGTGTGTCTCCCTCCCTGCCTGTCTCTCAGCAACTCTGTCTTCCTCGCC
CAGGTCTTAAATGAGTATTTCCACAATGTCTGTGAACTGGACCTGGTGTTCAACTTCTAC
AAGGTGGGTCCTGGCCGAGGGGCTGGGAGTTGGGGGCAGGAGGGTGGGCCAGAACCCTAC
AGCTGCCCCAGTGCCTCTGCTGATGCCTGGTCCCTGGCTGTCAGGCGTCAGAGCGCCCCC
CAGGTCCTGAGGTTCAGATCAGCATTCTGGGGTGATCGCCCCGGGATCTCCCCTTGACCT
CCCTTCACTCAGGTTTACACGGTCGTGGACGAGATGTTCCTGGCCGGTGAGATCCGTGAG
ACCAGCCAGACGAAGGTGCTCAAACAGCTGCTGATGCTGCAGTCCCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGGAGGCACAGACATGAGGTCTTTCCCGCCCCCCCCTCGCTGTGTCCTCTGCTCTGGG
CTTTCCCTCTTCCTCGGTTTCTTTCTGACCTTTTTCCGCCGTCGCTTCCCGATGCCCCTC
GTTGCTGGTGCTGTGTGTCTCCCTCCCTGCCTGTCTCTCAGCAACTCTGTCTTCCTCGCC
CAGGTCTTAAATGAGTATTTCCACAATGTCTGTGAACTGGACCTGGTGTTCAACTTCTAC
AAGGTGGGTCCTGGCCGAGGGGCTGGGAGTTGGGGGCAGGAGGGTGGGCCAGAACCCTAC
AGCTGCCCCAGTGCCTCTGCTGATGCCTGGTCCCTGGCTGTCAGGCGTCAGAGCGCCCCC
CAGGTCCTGAGGTTCAGATCAGCATTCTGGGGTGATCGCCCCGGGATCTCCCCTTGACCT
CCCTTCACTCAGGTTTACACGGTCGTGGACGAGATGTTCCTGGCCGGTGAGATCCGTGAG
ACCAGCCAGACGAAGGTGCTCAAACAGCTGCTGATGCTGCAGTCCCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               98-528, gnl|bosTau2|chr18 (46511986-46511552)
               

               
               98-528, gnl|Hg17|chr19 (52033987-52033550)
               

               
               98-528, gnl|Mm7|chr7 (14511621-14512299)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               98-528, gnl|bosTau2|chr18 (46511986-46511552)
               

               
               98-528, gnl|Hg17|chr19 (52033987-52033550)
               

               
               98-528, gnl|Mm7|chr7 (14511621-14512299)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nco (0.161734)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)

	98-528, gnl\|bosTau2\|chr18 (46511986-46511552)
	98-528, gnl\|Hg17\|chr19 (52033987-52033550)
	98-528, gnl\|Mm7\|chr7 (14511621-14512299)