Ss1.1-Pig2-42D04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGTGACCCACATGGAGATCACCCCGGAACAGAAGTCTGACAAGAGCGTACAGAACCTTC TAGCAACCAGGATTGCTGTCTACCTAATGACGTTCCTCATTGTGACCGTGGCCTGGGCAG CACACACCAGACTGTTCCAGATCGTTGGGAAAATAGATGACACACTTGCCCTGCTCAACC TGGCCTGCATGATGACCATCACCTTCCTGCCGTTCACCTTTTCCTTGATGGTGACTTTCC CCGAGGTGCCTCTGGGCATTTTCCTGTTCTGCGTGTGCGTGATCGCCATTGGGGCCATTC AGGCACTGATCGTCGTGTACGCCTTCCACTTCCCCCACCTCCTGAGTCCCCAGATCGAGG GCTCCGCGCACAGGGCCCTGCACCGCCGGCACATCCTGGGCATCATCCTCCAGGGGCCCA CGCTGTGCTTGGCCGCGGCCTGCTTCTCCCTGTTCTTCTACCCCGCGTCATACCTTCTGA TGGCGACAGTCGTCTTTCTCCCCTACGTCAGCAAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGTGACCCACATGGAGATCACCCCGGAACAGAAGTCTGACAAGAGCGTACAGAACCTTC TAGCAACCAGGATTGCTGTCTACCTAATGACGTTCCTCATTGTGACCGTGGCCTGGGCAG CACACACCAGACTGTTCCAGATCGTTGGGAAAATAGATGACACACTTGCCCTGCTCAACC TGGCCTGCATGATGACCATCACCTTCCTGCCGTTCACCTTTTCCTTGATGGTGACTTTCC CCGAGGTGCCTCTGGGCATTTTCCTGTTCTGCGTGTGCGTGATCGCCATTGGGGCCATTC AGGCACTGATCGTCGTGTACGCCTTCCACTTCCCCCACCTCCTGAGTCCCCAGATCGAGG GCTCCGCGCACAGGGCCCTGCACCGCCGGCACATCCTGGGCATCATCCTCCAGGGGCCCA CGCTGTGCTTGGCCGCGGCCTGCTTCTCCCTGTTCTTCTACCCCGCGTCATACCTTCTGA TGGCGACAGTCGTCTTTCTCCCCTACGTCAGCAAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 30-130, gnl|bosTau2|chr6 (63593119-63593019) | |
| 30-130, gnl|canFam2|chr3 (94395802-94395664) | |
| 30-130, gnl|danRer3|chr5 (35739243-35739376) | |
| 30-130, gnl|fr1|chrUn (174212370-174212267) | |
| 30-130, gnl|hg17|chr4 (933999-934148) | |
| 30-130, gnl|Hg17|chr4 (934036-934136) | |
| 30-130, gnl|loxAfr1|scaffold_181187 (101-236) | |
| 30-130, gnl|mm7|chr5 (107820376-107820508) | |
| 30-130, gnl|Mm7|chr5 (107820401-107820501) | |
| 30-130, gnl|monDom2|scaffold_10 (49450212-49450088) | |
| 30-130, gnl|panTro1|chr3 (1011378-1011527) | |
| 30-130, gnl|rn3|chr14 (1621859-1621716) | |
| 30-130, gnl|tetNig1|chr12 (3534860-3534981) | |
| 300-467, gnl|bosTau2|chr6 (63590517-63590350) | |
| 300-467, gnl|canFam2|chr3 (94393279-94393093) | |
| 300-467, gnl|danRer3|chr5 (35739920-35740097) | |
| 300-467, gnl|fr1|chrUn (174211666-174211489) | |
| 300-467, gnl|galGal2|chrZ (25359744-25359923) | |
| 300-467, gnl|hg17|chr4 (936803-936992) | |
| 300-467, gnl|Hg17|chr4 (936805-936972) | |
| 300-467, gnl|mm7|chr5 (107823966-107824150) | |
| 300-467, gnl|Mm7|chr5 (107823968-107824135) | |
| 300-467, gnl|oryCun1|scaffold_62675 (765-576) | |
| 300-467, gnl|rheMac2|chr1 (3011343-3011153) | |
| 300-467, gnl|rn3|chr14 (1618373-1618190) | |
| 300-467, gnl|tetNig1|chr12 (3535534-3535699) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 30-130, gnl|bosTau2|chr6 (63593119-63593019) | |
| 30-130, gnl|canFam2|chr3 (94395802-94395664) | |
| 30-130, gnl|danRer3|chr5 (35739243-35739376) | |
| 30-130, gnl|fr1|chrUn (174212370-174212267) | |
| 30-130, gnl|hg17|chr4 (933999-934148) | |
| 30-130, gnl|Hg17|chr4 (934036-934136) | |
| 30-130, gnl|loxAfr1|scaffold_181187 (101-236) | |
| 30-130, gnl|mm7|chr5 (107820376-107820508) | |
| 30-130, gnl|Mm7|chr5 (107820401-107820501) | |
| 30-130, gnl|monDom2|scaffold_10 (49450212-49450088) | |
| 30-130, gnl|panTro1|chr3 (1011378-1011527) | |
| 30-130, gnl|rn3|chr14 (1621859-1621716) | |
| 30-130, gnl|tetNig1|chr12 (3534860-3534981) | |
| 300-467, gnl|bosTau2|chr6 (63590517-63590350) | |
| 300-467, gnl|canFam2|chr3 (94393279-94393093) | |
| 300-467, gnl|danRer3|chr5 (35739920-35740097) | |
| 300-467, gnl|fr1|chrUn (174211666-174211489) | |
| 300-467, gnl|galGal2|chrZ (25359744-25359923) | |
| 300-467, gnl|hg17|chr4 (936803-936992) | |
| 300-467, gnl|Hg17|chr4 (936805-936972) | |
| 300-467, gnl|mm7|chr5 (107823966-107824150) | |
| 300-467, gnl|Mm7|chr5 (107823968-107824135) | |
| 300-467, gnl|oryCun1|scaffold_62675 (765-576) | |
| 300-467, gnl|rheMac2|chr1 (3011343-3011153) | |
| 300-467, gnl|rn3|chr14 (1618373-1618190) | |
| 300-467, gnl|tetNig1|chr12 (3535534-3535699) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ton (0.1755) |