Non-Coding RNA Search

Ss1.1-Pig2-42F04.5

Sequence:


               
               TGTGAGAGTGCCCCACCTCCACACCCTGCTCCAGCTGGATGCTTCTAGCTCCCGATACAG
CCCTGTCCTGTCCCGATTCCCTATACTCGTCCGGCAGGTGGCAGCAGCTTGTTCTGTGGT
TCTTTTGTGTGTGTGTCTTTTTATAGCTGCACCTGCGGCATATGGAAGTTCCCAGACTGG
GGGTCAGATTGGAGCCGCAGCTGCCAGCCTCCACCACAGCCACAGCAATGCCAGATCCTT
AACCCACTAAGAGAGGCCAGGGATCGAACCCACATCCTCATGGATACTAGCCGGGTTTGT
TACCACTGAGCCACAACGGGAACTCCAATTCTGTGGTTCGCTGTCCCCATATTTCAGGGG
TCCGGTCTGGCTTCTTTTCTACACTTTACCGGAAGGTCTGCTGCCAGAGCCGTCCCTGCC
GTGTGGCCTGCTCTTCTCAACTCTGGACACCATCACAGGCCAGCATCCCCCTGGGAAGGG
CCTTGGTGTTCTGCAGCAGGAGATGAAGCTGTGCAGCTGGTTCAAGCACCTGCCCGCATC
CGTCGTCGAGTTCCAGCCGGCTCTCCGGACGCTGGCGCACCCCATCAGCCAGGAGTTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTGAGAGTGCCCCACCTCCACACCCTGCTCCAGCTGGATGCTTCTAGCTCCCGATACAG
CCCTGTCCTGTCCCGATTCCCTATACTCGTCCGGCAGGTGGCAGCAGCTTGTTCTGTGGT
TCTTTTGTGTGTGTGTCTTTTTATAGCTGCACCTGCGGCATATGGAAGTTCCCAGACTGG
GGGTCAGATTGGAGCCGCAGCTGCCAGCCTCCACCACAGCCACAGCAATGCCAGATCCTT
AACCCACTAAGAGAGGCCAGGGATCGAACCCACATCCTCATGGATACTAGCCGGGTTTGT
TACCACTGAGCCACAACGGGAACTCCAATTCTGTGGTTCGCTGTCCCCATATTTCAGGGG
TCCGGTCTGGCTTCTTTTCTACACTTTACCGGAAGGTCTGCTGCCAGAGCCGTCCCTGCC
GTGTGGCCTGCTCTTCTCAACTCTGGACACCATCACAGGCCAGCATCCCCCTGGGAAGGG
CCTTGGTGTTCTGCAGCAGGAGATGAAGCTGTGCAGCTGGTTCAAGCACCTGCCCGCATC
CGTCGTCGAGTTCCAGCCGGCTCTCCGGACGCTGGCGCACCCCATCAGCCAGGAGTTCCT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               337-600, gnl|bosTau2|chr19 (52667122-52666868)
               

               
               337-600, gnl|Hg17|chr17 (68707222-68707725)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               337-600, gnl|bosTau2|chr19 (52667122-52666868)
               

               
               337-600, gnl|Hg17|chr17 (68707222-68707725)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ill (0.175593)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)
               

               
               ebs (0.118301)

	337-600, gnl\|bosTau2\|chr19 (52667122-52666868)
	337-600, gnl\|Hg17\|chr17 (68707222-68707725)