Ss1.1-Pig2-45H11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATTGGCAACGCCGACCGGCATCACTACGAGAGTTTTCAAGACGATGAAGGCGCGAGCAT GCTCATCCTTCTCGATAATGCCAAAAGCTTTGGGAACCCCTCGCTGGATGAGAGAAGCAT TCTTGCACCTCTGTACCAGTGCTGCATCATTCGGGTTTCTACCTGGAACAGACTGAACTC CCTGAAGAATGGTGTGCTGAAGTCTGCCTTAAAATCTGCCATGGCCCACGACCCCATCTC CCCAGTGCTCTCCGATCCGCACCTGGACGCGTTGGACCAGCGGCTCCTGAGTGTCCTGGC CACCGTGAAGCAGTGCACTGACCAGTTTGGGATGGACACGGTGCTGGTGGAGGACAGGAT GCCTCTCTCCCACTTGTGACTCTCCACACAAAATAAGTGAGACTTCTTTTTACAAAGATA GAGAAACAGCACAATCAGTTCTCAGCGGCATGAGATGGATTGGAAATGGCCAGCAACACG TTCTGATGATAGGGGACAGGGTGGTATAAGACTGGGAAAATCAGAACCGACTGCCATTCC CTGCCCTCCTTCTCCCACTTCTTAAATATATTTATCCCAGAATCTGGGGAGTATGTGTAT AGAGGTGGCATTCTAAAATTGTTCTTTAATACAAGGCTCTCCTATGGGCTTGGTAAATAA TTTCCTGTGCAGGACAGATTAATCGACAGGATCTGATTTACTGAGAATATTGCTCAGTAA TGTATTAATAAGGCATTTCTCCCTAGGTGCACTCGGGATTAATGTGTCAAATGAAGTTTA ATAAGGAAATGGAAGGATTCAAGTACATCTATCACATACTATTTTAGGAAAGATGAATCT CCTTTTTTTTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATTGGCAACGCCGACCGGCATCACTACGAGAGTTTTCAAGACGATGAAGGCGCGAGCAT GCTCATCCTTCTCGATAATGCCAAAAGCTTTGGGAACCCCTCGCTGGATGAGAGAAGCAT TCTTGCACCTCTGTACCAGTGCTGCATCATTCGGGTTTCTACCTGGAACAGACTGAACTC CCTGAAGAATGGTGTGCTGAAGTCTGCCTTAAAATCTGCCATGGCCCACGACCCCATCTC CCCAGTGCTCTCCGATCCGCACCTGGACGCGTTGGACCAGCGGCTCCTGAGTGTCCTGGC CACCGTGAAGCAGTGCACTGACCAGTTTGGGATGGACACGGTGCTGGTGGAGGACAGGAT GCCTCTCTCCCACTTGTGACTCTCCACACAAAATAAGTGAGACTTCTTTTTACAAAGATA GAGAAACAGCACAATCAGTTCTCAGCGGCATGAGATGGATTGGAAATGGCCAGCAACACG TTCTGATGATAGGGGACAGGGTGGTATAAGACTGGGAAAATCAGAACCGACTGCCATTCC CTGCCCTCCTTCTCCCACTTCTTAAATATATTTATCCCAGAATCTGGGGAGTATGTGTAT AGAGGTGGCATTCTAAAATTGTTCTTTAATACAAGGCTCTCCTATGGGCTTGGTAAATAA TTTCCTGTGCAGGACAGATTAATCGACAGGATCTGATTTACTGAGAATATTGCTCAGTAA TGTATTAATAAGGCATTTCTCCCTAGGTGCACTCGGGATTAATGTGTCAAATGAAGTTTA ATAAGGAAATGGAAGGATTCAAGTACATCTATCACATACTATTTTAGGAAAGATGAATCT CCTTTTTTTTTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 145-504, gnl|bosTau2|chr16 (42721458-42721815) | |
| 145-504, gnl|canFam2|chr7 (23723975-23723695) | |
| 145-504, gnl|danRer3|chr20 (14330786-14331034) | |
| 145-504, gnl|dasNov1|scaffold_137761 (322-54) | |
| 145-504, gnl|echTel1|scaffold_215897 (930-1205) | |
| 145-504, gnl|fr1|chrUn (71595161-71595390) | |
| 145-504, gnl|galGal2|chr8 (6265683-6265421) | |
| 145-504, gnl|Hg17|chr1 (175772702-175773059) | |
| 145-504, gnl|hg17|chr3 (171133496-171133775) | |
| 145-504, gnl|loxAfr1|scaffold_25290 (35696-35418) | |
| 145-504, gnl|mm7|chr1 (156644243-156643964) | |
| 145-504, gnl|Mm7|chr1 (156644245-156643887) | |
| 145-504, gnl|monDom2|scaffold_16 (31768103-31768383) | |
| 145-504, gnl|oryCun1|scaffold_132383 (5785-6048) | |
| 145-504, gnl|panTro1|chr2 (174622610-174622889) | |
| 145-504, gnl|rheMac2|chr2 (117081966-117081687) | |
| 145-504, gnl|rn3|chr13 (71895278-71895004) | |
| 145-504, gnl|tetNig1|chr1_random (2852782-2852553) | |
| 505-839, gnl|bosTau2|chr16 (42724164-42724500) | |
| 505-839, gnl|Hg17|chr1 (175776151-175776492) | |
| 505-839, gnl|Mm7|chr1 (156642130-156641804) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 145-504, gnl|bosTau2|chr16 (42721458-42721815) | |
| 145-504, gnl|canFam2|chr7 (23723975-23723695) | |
| 145-504, gnl|danRer3|chr20 (14330786-14331034) | |
| 145-504, gnl|dasNov1|scaffold_137761 (322-54) | |
| 145-504, gnl|echTel1|scaffold_215897 (930-1205) | |
| 145-504, gnl|fr1|chrUn (71595161-71595390) | |
| 145-504, gnl|galGal2|chr8 (6265683-6265421) | |
| 145-504, gnl|Hg17|chr1 (175772702-175773059) | |
| 145-504, gnl|hg17|chr3 (171133496-171133775) | |
| 145-504, gnl|loxAfr1|scaffold_25290 (35696-35418) | |
| 145-504, gnl|mm7|chr1 (156644243-156643964) | |
| 145-504, gnl|Mm7|chr1 (156644245-156643887) | |
| 145-504, gnl|monDom2|scaffold_16 (31768103-31768383) | |
| 145-504, gnl|oryCun1|scaffold_132383 (5785-6048) | |
| 145-504, gnl|panTro1|chr2 (174622610-174622889) | |
| 145-504, gnl|rheMac2|chr2 (117081966-117081687) | |
| 145-504, gnl|rn3|chr13 (71895278-71895004) | |
| 145-504, gnl|tetNig1|chr1_random (2852782-2852553) | |
| 505-839, gnl|bosTau2|chr16 (42724164-42724500) | |
| 505-839, gnl|Hg17|chr1 (175776151-175776492) | |
| 505-839, gnl|Mm7|chr1 (156642130-156641804) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ute (0.132784) |