Ss1.1-Pig2-46C07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGATGTACCGGGAGCGGCTGCGTACGCTCTTCGTCATCGCCGTGGTCATGAGCCTTCTC AACGCGCTTGGCTCCAGCGGCGGCAACATCTCCTGGAACGACTTTGTGCACGAGATGCTG GCCAAGGGCGAGGTGCAGCGGGTGCAGGTGGTGCCGGAGAGCGACGTGGTGGAGGTGTAC CTGCACCCCGGAGCCGTGGTGTTCGGCCGGCCTCGGCTGGCCCTGATGTACCGGATGCAG GTGGCGAATATCGACAGGTTCGAGGAGAAGCTTCGGGCGGCCGAGGACGAGCTCAACATC GGCGGCCAGGACCGGATCCCCGTGTCCTACAGGCGGACAGGCTTCTTTGGCAATGCCCTC TACGCCTTGGGGATGACCGCCGTGGGCCTGGCCATCCTGTGGTATGTCTTCCGTCTGGCC GGAATGACAGGAAGGGAAGGTGGATTCAGTGCCTTTAATCAGCTTAAAATGGCTCGTTTC ACAATCGTGGACGGCAAGATGGGGAAGGGGGTCAGCTTCAAGGACGTGGCGGGAATGCAC GATGCCAAGCTGGAGGTCAAGGAGTTCGTGGATTATCTGAAGAGTCCCGAGCGCTTCCTC CAGCTTGGCGCCAAGGTCCCCAAGGGTGCACTGCTGCTCGGCCCCCCAGGCTGCGGGAAG ACGCTGCTGGCCAAGGCGGTGGCCACGGAGGCCCAGGTGCCCTTCCTGGCAATGGCCGGC TCGGAGTTCGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGATGTACCGGGAGCGGCTGCGTACGCTCTTCGTCATCGCCGTGGTCATGAGCCTTCTC AACGCGCTTGGCTCCAGCGGCGGCAACATCTCCTGGAACGACTTTGTGCACGAGATGCTG GCCAAGGGCGAGGTGCAGCGGGTGCAGGTGGTGCCGGAGAGCGACGTGGTGGAGGTGTAC CTGCACCCCGGAGCCGTGGTGTTCGGCCGGCCTCGGCTGGCCCTGATGTACCGGATGCAG GTGGCGAATATCGACAGGTTCGAGGAGAAGCTTCGGGCGGCCGAGGACGAGCTCAACATC GGCGGCCAGGACCGGATCCCCGTGTCCTACAGGCGGACAGGCTTCTTTGGCAATGCCCTC TACGCCTTGGGGATGACCGCCGTGGGCCTGGCCATCCTGTGGTATGTCTTCCGTCTGGCC GGAATGACAGGAAGGGAAGGTGGATTCAGTGCCTTTAATCAGCTTAAAATGGCTCGTTTC ACAATCGTGGACGGCAAGATGGGGAAGGGGGTCAGCTTCAAGGACGTGGCGGGAATGCAC GATGCCAAGCTGGAGGTCAAGGAGTTCGTGGATTATCTGAAGAGTCCCGAGCGCTTCCTC CAGCTTGGCGCCAAGGTCCCCAAGGGTGCACTGCTGCTCGGCCCCCCAGGCTGCGGGAAG ACGCTGCTGGCCAAGGCGGTGGCCACGGAGGCCCAGGTGCCCTTCCTGGCAATGGCCGGC TCGGAGTTCGTG |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 1-213, gnl|bosTau2|chr18 (15359981-15360193) | |
| 1-213, gnl|canFam2|chr5 (67007188-67006928) | |
| 1-213, gnl|danRer3|chr7 (49045837-49046098) | |
| 1-213, gnl|dasNov1|scaffold_198597 (1342-1087) | |
| 1-213, gnl|echTel1|scaffold_306473 (36941-36688) | |
| 1-213, gnl|fr1|chrUn (95174667-95174400) | |
| 1-213, gnl|galGal2|chr11 (18795781-18795514) | |
| 1-213, gnl|hg17|chr16 (88117900-88118164) | |
| 1-213, gnl|Hg17|chr16 (88117944-88118156) | |
| 1-213, gnl|mm7|chr8 (121715439-121715693) | |
| 1-213, gnl|Mm7|chr8 (121715473-121715685) | |
| 1-213, gnl|monDom2|scaffold_23 (6753756-6753492) | |
| 1-213, gnl|oryCun1|scaffold_112870 (1770-1510) | |
| 1-213, gnl|panTro1|chr18 (83135236-83135488) | |
| 1-213, gnl|rheMac2|chr20 (87642245-87642509) | |
| 1-213, gnl|rn3|chr19 (53416001-53416253) | |
| 1-213, gnl|tetNig1|chr5 (7642699-7642963) | |
| 1-213, gnl|xenTro1|scaffold_13 (2536242-2536505) | |
| 581-732, gnl|bosTau2|chr18 (15364312-15364463) | |
| 581-732, gnl|canFam2|chr5 (67000834-67000683) | |
| 581-732, gnl|danRer3|chr7 (49052581-49052728) | |
| 581-732, gnl|dasNov1|scaffold_70191 (3855-4006) | |
| 581-732, gnl|echTel1|scaffold_306473 (34106-33955) | |
| 581-732, gnl|fr1|chrUn (95173557-95173408) | |
| 581-732, gnl|galGal2|chr11 (18789721-18789571) | |
| 581-732, gnl|hg17|chr16 (88125809-88125959) | |
| 581-732, gnl|Hg17|chr16 (88125811-88125962) | |
| 581-732, gnl|loxAfr1|scaffold_15673 (363-239) | |
| 581-732, gnl|mm7|chr8 (121721660-121721810) | |
| 581-732, gnl|Mm7|chr8 (121721662-121721813) | |
| 581-732, gnl|monDom2|scaffold_23 (6739904-6739754) | |
| 581-732, gnl|oryCun1|scaffold_210675 (86698-86848) | |
| 581-732, gnl|panTro1|chr18 (83143026-83143176) | |
| 581-732, gnl|rheMac2|chr18 (2350824-2350933) | |
| 581-732, gnl|rn3|chr19 (53421007-53421157) | |
| 581-732, gnl|tetNig1|chr5 (7643836-7643985) | |
| 581-732, gnl|xenTro1|scaffold_13 (2542801-2542948) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-213, gnl|bosTau2|chr18 (15359981-15360193) | |
| 1-213, gnl|canFam2|chr5 (67007188-67006928) | |
| 1-213, gnl|danRer3|chr7 (49045837-49046098) | |
| 1-213, gnl|dasNov1|scaffold_198597 (1342-1087) | |
| 1-213, gnl|echTel1|scaffold_306473 (36941-36688) | |
| 1-213, gnl|fr1|chrUn (95174667-95174400) | |
| 1-213, gnl|galGal2|chr11 (18795781-18795514) | |
| 1-213, gnl|hg17|chr16 (88117900-88118164) | |
| 1-213, gnl|Hg17|chr16 (88117944-88118156) | |
| 1-213, gnl|mm7|chr8 (121715439-121715693) | |
| 1-213, gnl|Mm7|chr8 (121715473-121715685) | |
| 1-213, gnl|monDom2|scaffold_23 (6753756-6753492) | |
| 1-213, gnl|oryCun1|scaffold_112870 (1770-1510) | |
| 1-213, gnl|panTro1|chr18 (83135236-83135488) | |
| 1-213, gnl|rheMac2|chr20 (87642245-87642509) | |
| 1-213, gnl|rn3|chr19 (53416001-53416253) | |
| 1-213, gnl|tetNig1|chr5 (7642699-7642963) | |
| 1-213, gnl|xenTro1|scaffold_13 (2536242-2536505) | |
| 581-732, gnl|bosTau2|chr18 (15364312-15364463) | |
| 581-732, gnl|canFam2|chr5 (67000834-67000683) | |
| 581-732, gnl|danRer3|chr7 (49052581-49052728) | |
| 581-732, gnl|dasNov1|scaffold_70191 (3855-4006) | |
| 581-732, gnl|echTel1|scaffold_306473 (34106-33955) | |
| 581-732, gnl|fr1|chrUn (95173557-95173408) | |
| 581-732, gnl|galGal2|chr11 (18789721-18789571) | |
| 581-732, gnl|hg17|chr16 (88125809-88125959) | |
| 581-732, gnl|Hg17|chr16 (88125811-88125962) | |
| 581-732, gnl|loxAfr1|scaffold_15673 (363-239) | |
| 581-732, gnl|mm7|chr8 (121721660-121721810) | |
| 581-732, gnl|Mm7|chr8 (121721662-121721813) | |
| 581-732, gnl|monDom2|scaffold_23 (6739904-6739754) | |
| 581-732, gnl|oryCun1|scaffold_210675 (86698-86848) | |
| 581-732, gnl|panTro1|chr18 (83143026-83143176) | |
| 581-732, gnl|rheMac2|chr18 (2350824-2350933) | |
| 581-732, gnl|rn3|chr19 (53421007-53421157) | |
| 581-732, gnl|tetNig1|chr5 (7643836-7643985) | |
| 581-732, gnl|xenTro1|scaffold_13 (2542801-2542948) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |