Non-Coding RNA Search

Ss1.1-Pig2-47D15.5

Sequence:


               
               GTGGGCGACTGGATGCGCTGCCTCTACGGCGAGCCCTACCCGTCGTGCAGCCCCGGCAAC
GCGTCCACGGCCGAGGAGGAGCTCTGCCGCCTCAAGCTCCTGGCCAAGCACCCCTGCCAC
ATCAAGAAGTTCGACCGGTACAAGTTCGAGATCACCGTGGGCATGCCCTACAGCGGCGCC
AACGGCTCCCGCAGCCCCGAGGAGGACGACGTCACCAAGGACATCGTGCTGCGGGCCAGC
AGCGAGTTCAAGGACGTGCTGCTGCACCTGCGCCAGGGCAGCGTCATCGAGTTCAGCACC
ATCCTCGAGGGCCGCCTGGGCAGCAAGTGGCCCGTCTTCGAGCTCAAGGCCATCAGCTGC
CTCAACTGCATGGCGCAGCTCTCGCCGGCCCGGCGGCACGTCAAGCTGGAGCGGGACTGG
CGCAGCACCGCGCACGCCGCCGTCAAGTTCGCCTTTGACTTCTTCTTCTTCCCCTTCCTG
TCCGCAGCCTGAGGACGCGTCCCGCCGCCGCCGGTGCACGTGGCTGCCAGGACGTCCCCC
ATGTGGCCCCAGCCAGGCGATGCAACACTAACCCCTGTGCGTGCGTGTGTGTGTGTGTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGGCGACTGGATGCGCTGCCTCTACGGCGAGCCCTACCCGTCGTGCAGCCCCGGCAAC
GCGTCCACGGCCGAGGAGGAGCTCTGCCGCCTCAAGCTCCTGGCCAAGCACCCCTGCCAC
ATCAAGAAGTTCGACCGGTACAAGTTCGAGATCACCGTGGGCATGCCCTACAGCGGCGCC
AACGGCTCCCGCAGCCCCGAGGAGGACGACGTCACCAAGGACATCGTGCTGCGGGCCAGC
AGCGAGTTCAAGGACGTGCTGCTGCACCTGCGCCAGGGCAGCGTCATCGAGTTCAGCACC
ATCCTCGAGGGCCGCCTGGGCAGCAAGTGGCCCGTCTTCGAGCTCAAGGCCATCAGCTGC
CTCAACTGCATGGCGCAGCTCTCGCCGGCCCGGCGGCACGTCAAGCTGGAGCGGGACTGG
CGCAGCACCGCGCACGCCGCCGTCAAGTTCGCCTTTGACTTCTTCTTCTTCCCCTTCCTG
TCCGCAGCCTGAGGACGCGTCCCGCCGCCGCCGGTGCACGTGGCTGCCAGGACGTCCCCC
ATGTGGCCCCAGCCAGGCGATGCAACACTAACCCCTGTGCGTGCGTGTGTGTGTGTGTGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-554, gnl|bosTau2|chr6 (59203926-59203368)
               

               
               2-554, gnl|Hg17|chr4 (6421774-6422326)
               

               
               2-554, gnl|Mm7|chr5 (36048754-36048200)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-554, gnl|bosTau2|chr6 (59203926-59203368)
               

               
               2-554, gnl|Hg17|chr4 (6421774-6422326)
               

               
               2-554, gnl|Mm7|chr5 (36048754-36048200)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               hyp (0.142837)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)
               

               
               jej (0.0989218)

	2-554, gnl\|bosTau2\|chr6 (59203926-59203368)
	2-554, gnl\|Hg17\|chr4 (6421774-6422326)
	2-554, gnl\|Mm7\|chr5 (36048754-36048200)