Ss1.1-Pig2-48E10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGAGACGGGATGCTGGACCTCATCTTGTCCCACGGAGAGTCCATGGCTCAGCCACTGTC CGTCTTCCGGGGGAATCAGGGCTTCAGCAACAACTGGCTGCGAGTGGTGCCGCGAACCCG GTTTGGGGCCTTCGCCAGGGGCGCTAAGGTCGTGCTTTACACCAAGAAGAGCGGGGCCCA CCTGAGGATCATTGACGGGGGCTCGGGGTACCTGTGCGAGATGGAGCCCGTGGCACACTT TGGCCTGGGGAAGGATGAAGCCAGCAGCGTAGAGGTGACATGGCCAGATGGCAAGATGGC AAGCCGGAATGTGGCCAGTGGGGAGATGAACTCTGTGCTGGAGATTCCCTATCCCCGGGA TGAGGACAAAGTTCAGGACCCGGCCCCACTGGAGTGCGGCCAAGGATTCTCCCAGCAAGA AAATGGCCATTGCATGGACACCAACGAATGCATCCAGTTCCCATTCGTGTGTCCTCGAGA CAAGCCCGTGTGTGTCAACACATACGGAAGCTACAGGTGCCGGACCAACAAGAGGTGCAG TCGGGGCTACGAGCCCAACGAGGACGGCACGGCCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGAGACGGGATGCTGGACCTCATCTTGTCCCACGGAGAGTCCATGGCTCAGCCACTGTC CGTCTTCCGGGGGAATCAGGGCTTCAGCAACAACTGGCTGCGAGTGGTGCCGCGAACCCG GTTTGGGGCCTTCGCCAGGGGCGCTAAGGTCGTGCTTTACACCAAGAAGAGCGGGGCCCA CCTGAGGATCATTGACGGGGGCTCGGGGTACCTGTGCGAGATGGAGCCCGTGGCACACTT TGGCCTGGGGAAGGATGAAGCCAGCAGCGTAGAGGTGACATGGCCAGATGGCAAGATGGC AAGCCGGAATGTGGCCAGTGGGGAGATGAACTCTGTGCTGGAGATTCCCTATCCCCGGGA TGAGGACAAAGTTCAGGACCCGGCCCCACTGGAGTGCGGCCAAGGATTCTCCCAGCAAGA AAATGGCCATTGCATGGACACCAACGAATGCATCCAGTTCCCATTCGTGTGTCCTCGAGA CAAGCCCGTGTGTGTCAACACATACGGAAGCTACAGGTGCCGGACCAACAAGAGGTGCAG TCGGGGCTACGAGCCCAACGAGGACGGCACGGCCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 77-249, gnl|bosTau2|chr26 (10241640-10241812) | |
| 77-249, gnl|canFam2|chr28 (14103982-14104177) | |
| 77-249, gnl|danRer3|chr1 (55005210-55005407) | |
| 77-249, gnl|fr1|chrUn (164791151-164791345) | |
| 77-249, gnl|galGal2|chrUn (68869592-68869396) | |
| 77-249, gnl|hg17|chr10 (99644985-99645180) | |
| 77-249, gnl|Hg17|chr10 (99645163-99644991) | |
| 77-249, gnl|loxAfr1|scaffold_6122 (68225-68031) | |
| 77-249, gnl|mm7|chr19 (42191520-42191711) | |
| 77-249, gnl|Mm7|chr19 (42191698-42191526) | |
| 77-249, gnl|monDom2|scaffold_14 (24524536-24524341) | |
| 77-249, gnl|oryCun1|scaffold_187908 (1865-2058) | |
| 77-249, gnl|panTro1|chr8 (101380828-101381023) | |
| 77-249, gnl|rheMac2|chr9 (97490524-97490719) | |
| 77-249, gnl|rn3|chr1 (248819145-248818954) | |
| 77-249, gnl|tetNig1|chr18 (1933198-1933010) | |
| 77-249, gnl|xenTro1|scaffold_51 (1734876-1735075) | |
| 437-576, gnl|bosTau2|chr26 (10257411-10257550) | |
| 437-576, gnl|Hg17|chr10 (99630140-99630001) | |
| 437-576, gnl|Mm7|chr19 (42178140-42178001) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 77-249, gnl|bosTau2|chr26 (10241640-10241812) | |
| 77-249, gnl|canFam2|chr28 (14103982-14104177) | |
| 77-249, gnl|danRer3|chr1 (55005210-55005407) | |
| 77-249, gnl|fr1|chrUn (164791151-164791345) | |
| 77-249, gnl|galGal2|chrUn (68869592-68869396) | |
| 77-249, gnl|hg17|chr10 (99644985-99645180) | |
| 77-249, gnl|Hg17|chr10 (99645163-99644991) | |
| 77-249, gnl|loxAfr1|scaffold_6122 (68225-68031) | |
| 77-249, gnl|mm7|chr19 (42191520-42191711) | |
| 77-249, gnl|Mm7|chr19 (42191698-42191526) | |
| 77-249, gnl|monDom2|scaffold_14 (24524536-24524341) | |
| 77-249, gnl|oryCun1|scaffold_187908 (1865-2058) | |
| 77-249, gnl|panTro1|chr8 (101380828-101381023) | |
| 77-249, gnl|rheMac2|chr9 (97490524-97490719) | |
| 77-249, gnl|rn3|chr1 (248819145-248818954) | |
| 77-249, gnl|tetNig1|chr18 (1933198-1933010) | |
| 77-249, gnl|xenTro1|scaffold_51 (1734876-1735075) | |
| 437-576, gnl|bosTau2|chr26 (10257411-10257550) | |
| 437-576, gnl|Hg17|chr10 (99630140-99630001) | |
| 437-576, gnl|Mm7|chr19 (42178140-42178001) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| hyp (0.285673) | |
| cut (0.169924) | |
| eru (0.120048) | |
| ecc (0.115035) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.285673) | |
| cut (0.169924) | |
| eru (0.120048) | |
| ecc (0.115035) |