Ss1.1-Pig2-49N05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAATGTGGCTGTGAAGATCTTCTCCTCCCGGGATGAGAAGTCATGGTTCAGGGAAACAGA GCTGTACAACACTGTGATGCTGAGGCATGAAAACATTTTGGGTTTCATAGCCTCAGACAT GACATCAAGACACTCCAGTACACAGTTGTGGTTAATCACACACTATCATGAAATGGGATC ATTGTACGACTACCTTCAGCTCACTACTCTGGATACAGTTAGCTGCCTGCGAATAGTGCT GTCCATAGCTAGTGGTCTTGCACATTTGCACATAGAGATATTTGGGACCCAAGGAAAACC AGCCATTGCTCATCGAGATTTGAAAAGCAAAAACATCCTGGTTAAGAAGAATGGACAGTG TTGCATAGCAGATTTGGGCCTGGCGGTCATGCATTCCCAGAGCACCAATCAGCTCGACGT GGGGAACAACCCCCGTGTGGGCACCAAACGTTACATGGCCCCCGAAGTTCTCGATGAGAC CATCCAGGTGGATTGCTTCGATTCTTATAAGAGAGTTGATATTTGGGCCTTTGGACTTGT CTTGTGGGAAGTGGCCAGGCGGATGGTGAGCAATGGTATTGTGGAAGATTACAAGCCACC ATTTTATGACGTGGTTCCCAATGACCCTAGTTTTGAAGATATGAGGAAGGTGGTCTGCGT GGATCAACAGAGGCCCAACATACCCAACAGATGGTTCTCAGACCCGACATTAACCTCTCT GGCTAAGCTGATGAAAGAGTGCTGGTATCAAAATCCATCTGCAAGACTCACAGCTCTGCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAATGTGGCTGTGAAGATCTTCTCCTCCCGGGATGAGAAGTCATGGTTCAGGGAAACAGA GCTGTACAACACTGTGATGCTGAGGCATGAAAACATTTTGGGTTTCATAGCCTCAGACAT GACATCAAGACACTCCAGTACACAGTTGTGGTTAATCACACACTATCATGAAATGGGATC ATTGTACGACTACCTTCAGCTCACTACTCTGGATACAGTTAGCTGCCTGCGAATAGTGCT GTCCATAGCTAGTGGTCTTGCACATTTGCACATAGAGATATTTGGGACCCAAGGAAAACC AGCCATTGCTCATCGAGATTTGAAAAGCAAAAACATCCTGGTTAAGAAGAATGGACAGTG TTGCATAGCAGATTTGGGCCTGGCGGTCATGCATTCCCAGAGCACCAATCAGCTCGACGT GGGGAACAACCCCCGTGTGGGCACCAAACGTTACATGGCCCCCGAAGTTCTCGATGAGAC CATCCAGGTGGATTGCTTCGATTCTTATAAGAGAGTTGATATTTGGGCCTTTGGACTTGT CTTGTGGGAAGTGGCCAGGCGGATGGTGAGCAATGGTATTGTGGAAGATTACAAGCCACC ATTTTATGACGTGGTTCCCAATGACCCTAGTTTTGAAGATATGAGGAAGGTGGTCTGCGT GGATCAACAGAGGCCCAACATACCCAACAGATGGTTCTCAGACCCGACATTAACCTCTCT GGCTAAGCTGATGAAAGAGTGCTGGTATCAAAATCCATCTGCAAGACTCACAGCTCTGCG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 101-387, gnl|bosTau2|chr28 (31947519-31947805) | |
| 101-387, gnl|Hg17|chr10 (88668908-88669194) | |
| 101-387, gnl|Mm7|chr14 (31856207-31855921) | |
| 575-706, gnl|bosTau2|chr2 (11676058-11676189) | |
| 575-706, gnl|canFam2|chr36 (6748701-6748838) | |
| 575-706, gnl|danRer3|chrNA (166761518-166761381) | |
| 575-706, gnl|dasNov1|scaffold_9734 (54083-54221) | |
| 575-706, gnl|echTel1|scaffold_308225 (5485-5622) | |
| 575-706, gnl|fr1|chrUn (25755658-25755521) | |
| 575-706, gnl|galGal2|chr7 (36886616-36886761) | |
| 575-706, gnl|hg17|chr2 (158420456-158420593) | |
| 575-706, gnl|Hg17|chr2 (158420591-158420460) | |
| 575-706, gnl|loxAfr1|scaffold_10684 (44045-43908) | |
| 575-706, gnl|mm7|chr2 (58448998-58449135) | |
| 575-706, gnl|Mm7|chr2 (58449133-58449002) | |
| 575-706, gnl|monDom2|scaffold_2 (51152071-51152208) | |
| 575-706, gnl|oryCun1|scaffold_198278 (145635-145498) | |
| 575-706, gnl|panTro1|chr13 (47614575-47614712) | |
| 575-706, gnl|rheMac2|chr12 (21331881-21332018) | |
| 575-706, gnl|rn3|chr3 (40088990-40089127) | |
| 575-706, gnl|tetNig1|chr2 (12163952-12163815) | |
| 575-706, gnl|xenTro1|scaffold_279 (405419-405282) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 101-387, gnl|bosTau2|chr28 (31947519-31947805) | |
| 101-387, gnl|Hg17|chr10 (88668908-88669194) | |
| 101-387, gnl|Mm7|chr14 (31856207-31855921) | |
| 575-706, gnl|bosTau2|chr2 (11676058-11676189) | |
| 575-706, gnl|canFam2|chr36 (6748701-6748838) | |
| 575-706, gnl|danRer3|chrNA (166761518-166761381) | |
| 575-706, gnl|dasNov1|scaffold_9734 (54083-54221) | |
| 575-706, gnl|echTel1|scaffold_308225 (5485-5622) | |
| 575-706, gnl|fr1|chrUn (25755658-25755521) | |
| 575-706, gnl|galGal2|chr7 (36886616-36886761) | |
| 575-706, gnl|hg17|chr2 (158420456-158420593) | |
| 575-706, gnl|Hg17|chr2 (158420591-158420460) | |
| 575-706, gnl|loxAfr1|scaffold_10684 (44045-43908) | |
| 575-706, gnl|mm7|chr2 (58448998-58449135) | |
| 575-706, gnl|Mm7|chr2 (58449133-58449002) | |
| 575-706, gnl|monDom2|scaffold_2 (51152071-51152208) | |
| 575-706, gnl|oryCun1|scaffold_198278 (145635-145498) | |
| 575-706, gnl|panTro1|chr13 (47614575-47614712) | |
| 575-706, gnl|rheMac2|chr12 (21331881-21332018) | |
| 575-706, gnl|rn3|chr3 (40088990-40089127) | |
| 575-706, gnl|tetNig1|chr2 (12163952-12163815) | |
| 575-706, gnl|xenTro1|scaffold_279 (405419-405282) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ssp (0.13552) | |
| pla (0.133672) | |
| clu (0.119646) |