Non-Coding RNA Search

Ss1.1-Pig2-4H01.5

Sequence:


               
               GAAGAAGTGCAAACCCCCTTTTCCACAGAAGTGGGTGTGCTGAAGAATATTCCCGAATCC
ACCTGTAACTCCTAGGAGGTAGGCGTGTCCTCTCAGAAGCTGCGAGTCACGGCCTTCCAG
CTGTGCTGGGTGATGTGGGATAGAAGGCCTCGAATGTATTAGCCTGGGGCCACCGGTGCC
AGGCTGCTGCCCCTTTGCCAAGCCTATGTGCAATACGCCTGCCCTCGGTGCTTCAGCGCA
GGAAGCAGGAGAACGAATGCCGTCTGAGAGCTGTGAGCAAGGCTGGGGTGTGGGGGGACC
TGGCCTGCGGCAGTTTTTGTTTTTGTTTTTTTTAAACATTTATCTTTACCATCTTACCTG
TTTATAAAATTTTAGTTCCTTGAGTGACTGAAACACCAATGTTTTTATCACTTACTCATT
TGCACTTTATTTTTTTTCCCTCCACACCTGTTCTCTGGACCGTCGTGGCTACAAGGGCCG
GAGTGCCCCTCCCCGTCTGGTGGGTCTGGTGGGGCGGCTCCGTTTGCCCTCTTGCCCCGC
CCTCGTCTCCCCTTTTCCCTTTGCTGTTCAGAGAACTTGTGTTGAGGGGAGTTGAAATTC
ACAGGCCAGGGCACATCTTTTATTTATTTAATTACGTTGCCCAACAGAACTTGATTGTAA
ATAAAAAATCTGTTATATACTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGAAGTGCAAACCCCCTTTTCCACAGAAGTGGGTGTGCTGAAGAATATTCCCGAATCC
ACCTGTAACTCCTAGGAGGTAGGCGTGTCCTCTCAGAAGCTGCGAGTCACGGCCTTCCAG
CTGTGCTGGGTGATGTGGGATAGAAGGCCTCGAATGTATTAGCCTGGGGCCACCGGTGCC
AGGCTGCTGCCCCTTTGCCAAGCCTATGTGCAATACGCCTGCCCTCGGTGCTTCAGCGCA
GGAAGCAGGAGAACGAATGCCGTCTGAGAGCTGTGAGCAAGGCTGGGGTGTGGGGGGACC
TGGCCTGCGGCAGTTTTTGTTTTTGTTTTTTTTAAACATTTATCTTTACCATCTTACCTG
TTTATAAAATTTTAGTTCCTTGAGTGACTGAAACACCAATGTTTTTATCACTTACTCATT
TGCACTTTATTTTTTTTCCCTCCACACCTGTTCTCTGGACCGTCGTGGCTACAAGGGCCG
GAGTGCCCCTCCCCGTCTGGTGGGTCTGGTGGGGCGGCTCCGTTTGCCCTCTTGCCCCGC
CCTCGTCTCCCCTTTTCCCTTTGCTGTTCAGAGAACTTGTGTTGAGGGGAGTTGAAATTC
ACAGGCCAGGGCACATCTTTTATTTATTTAATTACGTTGCCCAACAGAACTTGATTGTAA
ATAAAAAATCTGTTATATACTTTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               135-684, gnl|bosTau2|chr3 (80649219-80648682)
               

               
               135-684, gnl|Hg17|chr2 (233985779-233986311)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               135-684, gnl|bosTau2|chr3 (80649219-80648682)
               

               
               135-684, gnl|Hg17|chr2 (233985779-233986311)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               eje (0.197668)
               

               
               che (0.136314)
               

               
               ese (0.126502)
               

               
               jca (0.11396)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.197668)
               

               
               che (0.136314)
               

               
               ese (0.126502)
               

               
               jca (0.11396)

	135-684, gnl\|bosTau2\|chr3 (80649219-80648682)
	135-684, gnl\|Hg17\|chr2 (233985779-233986311)