Non-Coding RNA Search

Ss1.1-Pig2-50D17.5

Sequence:


               
               GGCAAGGTCTAATGTCATCAGTTATGTCACCGTCAATGATTCTCCAGACTCTGACTCTTC
CTTGAGCAGCCCATATTCCACTGATACCCTCAGTGCTCTCCGGGGCAATAGTGGACCCCT
TCCCGAGGGGCCTGGCAAAGTCGTGGGGGATGGCACTGGCACCCGCACCATCATTGTGCC
TCCACTGAAAACTCAGCTTGGTGACTGCACTGTAGCAACCCAGGCCTCAGGTCTCCTGAG
CAGTAAGACCAAGCCAGTGGCTTCAGTGAGTGGGCAGTCATCTGGATGTTGTATCACCCC
CACAGGGTATCGAGCTCAACGCGGGGGGACCAGCGCAGCACAGCCACTCAACCTTAGCCA
GGTAAGAGCTAGGGGCTGCTGCCTTCTGTTTGGGGCCCCCCCTATTGTTACTCTCTGGAG
AACCCTGCTTCTGGCTGGATCGCTGAATAAAGCCAAATGAAGCCCCAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCAAGGTCTAATGTCATCAGTTATGTCACCGTCAATGATTCTCCAGACTCTGACTCTTC
CTTGAGCAGCCCATATTCCACTGATACCCTCAGTGCTCTCCGGGGCAATAGTGGACCCCT
TCCCGAGGGGCCTGGCAAAGTCGTGGGGGATGGCACTGGCACCCGCACCATCATTGTGCC
TCCACTGAAAACTCAGCTTGGTGACTGCACTGTAGCAACCCAGGCCTCAGGTCTCCTGAG
CAGTAAGACCAAGCCAGTGGCTTCAGTGAGTGGGCAGTCATCTGGATGTTGTATCACCCC
CACAGGGTATCGAGCTCAACGCGGGGGGACCAGCGCAGCACAGCCACTCAACCTTAGCCA
GGTAAGAGCTAGGGGCTGCTGCCTTCTGTTTGGGGCCCCCCCTATTGTTACTCTCTGGAG
AACCCTGCTTCTGGCTGGATCGCTGAATAAAGCCAAATGAAGCCCCAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-232, gnl|bosTau2|chr3 (27192026-27191795)
               

               
               1-232, gnl|Hg17|chr1 (114224632-114224863)
               

               
               1-232, gnl|Mm7|chr3 (103541008-103540777)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-232, gnl|bosTau2|chr3 (27192026-27191795)
               

               
               1-232, gnl|Hg17|chr1 (114224632-114224863)
               

               
               1-232, gnl|Mm7|chr3 (103541008-103540777)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nbm (0.0993246)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nbm (0.0993246)

	1-232, gnl\|bosTau2\|chr3 (27192026-27191795)
	1-232, gnl\|Hg17\|chr1 (114224632-114224863)
	1-232, gnl\|Mm7\|chr3 (103541008-103540777)