Non-Coding RNA Search

Ss1.1-Pig2-50F17.5

Sequence:


               
               ATTTTATAATGGCCAAAGAAGGGGTTTACATAGACATGTTTATTAATGGAACTCACTTTG
TAATTAGTTAATAAGCTAATTCATTTTAGCTTCAAATCAGTTCCATCCCATTCCTCAATC
CCTTCCTGATGTCTAACAGTTAATGTCCTGCAGCATGAGGAGACCTTCCTGTGGCACTTT
GGGAATTATCTGTGTGGGGCTTAAATAGGTACAGTTTATAAACTTCTCTCTCTCTTCTTC
AGCCCCCACTAGGATTGATAAAGGCATTTCCAGAGGCAAATGATTCTCTTCCTCTCTCTG
CTCATCCTCCTCCAGCCCCTCCTCTTCCTCTTCTGTCTCTTCCTCCTCCTCCTCCTCCTC
CTCCTCTTCCTCCCCCGCCTGCACATAGTCAGCCTCTTCCATCTCCTCTTCATCTTTGGC
CTCTGCCTCTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTATAATGGCCAAAGAAGGGGTTTACATAGACATGTTTATTAATGGAACTCACTTTG
TAATTAGTTAATAAGCTAATTCATTTTAGCTTCAAATCAGTTCCATCCCATTCCTCAATC
CCTTCCTGATGTCTAACAGTTAATGTCCTGCAGCATGAGGAGACCTTCCTGTGGCACTTT
GGGAATTATCTGTGTGGGGCTTAAATAGGTACAGTTTATAAACTTCTCTCTCTCTTCTTC
AGCCCCCACTAGGATTGATAAAGGCATTTCCAGAGGCAAATGATTCTCTTCCTCTCTCTG
CTCATCCTCCTCCAGCCCCTCCTCTTCCTCTTCTGTCTCTTCCTCCTCCTCCTCCTCCTC
CTCCTCTTCCTCCCCCGCCTGCACATAGTCAGCCTCTTCCATCTCCTCTTCATCTTTGGC
CTCTGCCTCTTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               33-432, gnl|bosTau2|chr5 (13798355-13798758)
               

               
               33-432, gnl|Hg17|chr12 (89849648-89850052)
               

               
               33-432, gnl|Mm7|chr10 (97257290-97256885)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               33-432, gnl|bosTau2|chr5 (13798355-13798758)
               

               
               33-432, gnl|Hg17|chr12 (89849648-89850052)
               

               
               33-432, gnl|Mm7|chr10 (97257290-97256885)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cte (0.29274)
               

               
               tes (0.207814)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               tes (0.207814)

	33-432, gnl\|bosTau2\|chr5 (13798355-13798758)
	33-432, gnl\|Hg17\|chr12 (89849648-89850052)
	33-432, gnl\|Mm7\|chr10 (97257290-97256885)