Non-Coding RNA Search

Ss1.1-Pig2-51I03.5

Sequence:


               
               TTGGCAAAGGACTTTGAAGATTTCCGTAAAAAGTGGCAGAGAACAGACCATGAGCTGGGC
AAATACAAGGATCTTTTGATGAAAGCAGAGACCGAGCGCAGTGCTCTGGATGTTAAGCTG
AAGCACGCGCGCAATCAGGTGGATGTAGAGATCAAACGGAGACAGCGAGCTGAGGCTGAC
TGCGAAAAGCTGGAAAGACAGATTCAGCTGATTCGAGAGATGCTCATGTGTGACACATCT
GGCAGCATCCAACTAAGCGAGGAGCAAAAATCAGCTCTGGCTTTTCTCAACAGAGGCCAA
CCATCCAGCAGCAATGCTGGGAACAAAAGACTGTCAACCATTGATGAATCTGGTTCCATT
TTATCAGATATCAGCTTTGACAAGACTGATGAATCACTGGGTTTTGGGGAGGCCTAACCA
AAGAAAGAAATTAATACAGTGTAATTGTCAACAGGATTGGGATTCTTCTTTGGTAAAGAG
TTTTAAACTGAAGAAGAGAGAAAAGAGGCGCTCTAGTAGCCGACAGTTCATTGATGGTCC
CCCTGGACCTGTAAAGAAAACTCGTTCCATTGGCTCCACAGTAGACCAGGGAAATGAATC
CATAGTTGCAAAAACTACAGTGACTGTTCCCAATGATGGCGGGCCCATCGAAGCTGTGTC
CACTATTGAGACCGTGCCATATTGGACCAGGAGCCGGAGGAAAACAGGTACTTTACAGCC
TTGGAACAGTGACTCCACCTTGAGCAGCAGGCAGCCAGAGCCAAAAACTGAGACAGACGG
CTCCAGCACTCCGCAAGGCAACGGAGGGATGCGCCTGCATGATTTCGTCTCCAAGACGGT
TATTAAACCCGAATCTTGTGTTCCATGTGGAAAGCGAATAAAATTTGGCAAGCTGTCTCT
GAAGTGTCGAGACTGTCGTGTGGTCTCTCACCCAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGCAAAGGACTTTGAAGATTTCCGTAAAAAGTGGCAGAGAACAGACCATGAGCTGGGC
AAATACAAGGATCTTTTGATGAAAGCAGAGACCGAGCGCAGTGCTCTGGATGTTAAGCTG
AAGCACGCGCGCAATCAGGTGGATGTAGAGATCAAACGGAGACAGCGAGCTGAGGCTGAC
TGCGAAAAGCTGGAAAGACAGATTCAGCTGATTCGAGAGATGCTCATGTGTGACACATCT
GGCAGCATCCAACTAAGCGAGGAGCAAAAATCAGCTCTGGCTTTTCTCAACAGAGGCCAA
CCATCCAGCAGCAATGCTGGGAACAAAAGACTGTCAACCATTGATGAATCTGGTTCCATT
TTATCAGATATCAGCTTTGACAAGACTGATGAATCACTGGGTTTTGGGGAGGCCTAACCA
AAGAAAGAAATTAATACAGTGTAATTGTCAACAGGATTGGGATTCTTCTTTGGTAAAGAG
TTTTAAACTGAAGAAGAGAGAAAAGAGGCGCTCTAGTAGCCGACAGTTCATTGATGGTCC
CCCTGGACCTGTAAAGAAAACTCGTTCCATTGGCTCCACAGTAGACCAGGGAAATGAATC
CATAGTTGCAAAAACTACAGTGACTGTTCCCAATGATGGCGGGCCCATCGAAGCTGTGTC
CACTATTGAGACCGTGCCATATTGGACCAGGAGCCGGAGGAAAACAGGTACTTTACAGCC
TTGGAACAGTGACTCCACCTTGAGCAGCAGGCAGCCAGAGCCAAAAACTGAGACAGACGG
CTCCAGCACTCCGCAAGGCAACGGAGGGATGCGCCTGCATGATTTCGTCTCCAAGACGGT
TATTAAACCCGAATCTTGTGTTCCATGTGGAAAGCGAATAAAATTTGGCAAGCTGTCTCT
GAAGTGTCGAGACTGTCGTGTGGTCTCTCACCCAGA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q6PJ26_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q6PJ26_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-193, gnl|bosTau2|chr5 (24846504-24846696)
               

               
               1-193, gnl|Hg17|chr12 (48686675-48686483)
               

               
               1-193, gnl|Mm7|chr15 (99625050-99624858)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-193, gnl|bosTau2|chr5 (24846504-24846696)
               

               
               1-193, gnl|Hg17|chr12 (48686675-48686483)
               

               
               1-193, gnl|Mm7|chr15 (99625050-99624858)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eep (0.122564)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)
               

               
               ecc (0.115035)

	1-193, gnl\|bosTau2\|chr5 (24846504-24846696)
	1-193, gnl\|Hg17\|chr12 (48686675-48686483)
	1-193, gnl\|Mm7\|chr15 (99625050-99624858)