Non-Coding RNA Search

Ss1.1-Pig2-51L08.5

Sequence:


               
               GATGCGCTACGATGACCACACTGTGTGCAAGCCCCTCATCTCCCGGGAGCAGCGCTTCTA
CGAGTCCCTCCCTCCTGAAATGAAGGAGTTCACCCCTCTCCCAACAGGCGTGGTGTCTGT
GTGTTTTGAGGGGGACAGTGATGGTTATATCAACTTGGTGGCCTACCCTTATGTGGAAAG
TGAGACTGTGGAGCAGGATGACACACCAGAGCGGGAGCAACCTCGACGCAAGCACTCCCG
CAGGAGCCTGCACCGGTCATGAAGTGGCAGTGACCACAAGGAGGAGAAAGCTAGCCTGTC
TCTCGAAACCTCAGATAGCCCCCAGGAGGCAAAGAGTCCAAAGGTGGAGCTACACAGCCA
CTCGGATGTCCCTTTCCAGATGCTGGATGGCAACAGTGGTTTGAGTTCTGAGAAGATCAG
CCACAACCCTTGGAGCCTGCGCTGTCACAAGCAGCAGCTGAGCCGCATGCGCTCTGAGTC
CAAGGACCGAAAGCTCTACACATACCTGTACAACCTAAAATGTTTTAAAGATAGTAAAAG
CAAAAAAGTATTATGAAATGAGAATTCTTAAAATCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGCGCTACGATGACCACACTGTGTGCAAGCCCCTCATCTCCCGGGAGCAGCGCTTCTA
CGAGTCCCTCCCTCCTGAAATGAAGGAGTTCACCCCTCTCCCAACAGGCGTGGTGTCTGT
GTGTTTTGAGGGGGACAGTGATGGTTATATCAACTTGGTGGCCTACCCTTATGTGGAAAG
TGAGACTGTGGAGCAGGATGACACACCAGAGCGGGAGCAACCTCGACGCAAGCACTCCCG
CAGGAGCCTGCACCGGTCATGAAGTGGCAGTGACCACAAGGAGGAGAAAGCTAGCCTGTC
TCTCGAAACCTCAGATAGCCCCCAGGAGGCAAAGAGTCCAAAGGTGGAGCTACACAGCCA
CTCGGATGTCCCTTTCCAGATGCTGGATGGCAACAGTGGTTTGAGTTCTGAGAAGATCAG
CCACAACCCTTGGAGCCTGCGCTGTCACAAGCAGCAGCTGAGCCGCATGCGCTCTGAGTC
CAAGGACCGAAAGCTCTACACATACCTGTACAACCTAAAATGTTTTAAAGATAGTAAAAG
CAAAAAAGTATTATGAAATGAGAATTCTTAAAATCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55620331|ref|XP_516467.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55620331|ref|XP_516467.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               100-318, gnl|bosTau2|chr22 (38105346-38105128)
               

               
               100-318, gnl|Hg17|chr3 (49750864-49750649)
               

               
               100-318, gnl|Mm7|chr9 (107763649-107763867)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               100-318, gnl|bosTau2|chr22 (38105346-38105128)
               

               
               100-318, gnl|Hg17|chr3 (49750864-49750649)
               

               
               100-318, gnl|Mm7|chr9 (107763649-107763867)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ctl (0.153069)
               

               
               med (0.116252)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)
               

               
               med (0.116252)

	100-318, gnl\|bosTau2\|chr22 (38105346-38105128)
	100-318, gnl\|Hg17\|chr3 (49750864-49750649)
	100-318, gnl\|Mm7\|chr9 (107763649-107763867)