Ss1.1-Pig2-53N22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGAGCCACTCTGTGCATGGGGGGCTGCTCGGGGCGGGGTGCCGGGGAGTGGGGGGCAGT GCGGAGCGGCTGGAAGAGAGCGTGGTGTGATGGGAAGGGAGCCAGCCCGGGGCGGGCTGC ACAGGGCAGAGGGCGTGGGGTGGGCAGCCTCCTGGCCTGGTGGATCAGCACTGCCTAGAG CCCCTCCCACTTTTACCCTGGGTACCTCAGGCCCCCTTTTGCTTGGCAGGACAGGGGGCC CGTTCCCTGGTTCTGGCCTCCAGTCGGGCAAAAAGGGACAGGTCCCTGTGACAGGTGCTC ATGGCCTCTGAGGCAGGGGCTGCAGCCACCAAGTGGAAGTCTTGTTTTTCTTTATAATAA AATTACTGGGGACACCTCAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGAGCCACTCTGTGCATGGGGGGCTGCTCGGGGCGGGGTGCCGGGGAGTGGGGGGCAGT GCGGAGCGGCTGGAAGAGAGCGTGGTGTGATGGGAAGGGAGCCAGCCCGGGGCGGGCTGC ACAGGGCAGAGGGCGTGGGGTGGGCAGCCTCCTGGCCTGGTGGATCAGCACTGCCTAGAG CCCCTCCCACTTTTACCCTGGGTACCTCAGGCCCCCTTTTGCTTGGCAGGACAGGGGGCC CGTTCCCTGGTTCTGGCCTCCAGTCGGGCAAAAAGGGACAGGTCCCTGTGACAGGTGCTC ATGGCCTCTGAGGCAGGGGCTGCAGCCACCAAGTGGAAGTCTTGTTTTTCTTTATAATAA AATTACTGGGGACACCTCAAAAAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 189-346, - strand, RNAz p=0.849827 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 189-346, - strand, RNAz p=0.849827 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 283-366, + strand, RNAmicro p=0.972396 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-379, gnl|bosTau2|chr29 (36664773-36664420) | |
| 1-379, gnl|Hg17|chr11 (66384153-66384522) | |
| 1-379, gnl|Mm7|chr19 (4506972-4506590) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-379, gnl|bosTau2|chr29 (36664773-36664420) | |
| 1-379, gnl|Hg17|chr11 (66384153-66384522) | |
| 1-379, gnl|Mm7|chr19 (4506972-4506590) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eru (0.120048) |