Non-Coding RNA Search

Ss1.1-Pig2-54B07.5

Sequence:


               
               TTGCGGGTGAATCAACGCGGAGCCGAGACGTGACTTTGTCTTCCCGCCCCATCTGCGAAC
GGGCCGTGGACTGCTTGGACGACTGTCTAATGCAGGGGAACCTGGCTGAGACGCTTTAAT
AAATATTCTACGCTAAGTACCGTTCCACCTTCGGTTCAGAACTGACCTCAGTTCAACGCT
CCTTGTGCTCGTGGCGGTAATTCCTGGCGGCATCAGCCAACCAGGACCCAGACCTCTGCT
TCTTTTTTAAATCACCTATCGCCAGGGCCCAGCGCAGCGGAGAGGTCCAGTGAAGGTTTG
CAGAATGAATTGTGTCTGTTATTTCTACAACGTCTTTCAAAGAACGAAAAAGACGCGCGC
CCTCCTGTTTGTATTGCAGAATCCTGACGTTCCTTCCTTTTTTGGAACTCATTAGCAAAT
CTCTCAGGTAATATGAATGAGCAAAGTGGATGTGTGAGGATTTCTGTGACCACTGGAGAC
CGAAGTGGCGGCTTAAGGACTCATCTCGCCAGCATGTTGGTCCAGGGAGATAAGAACTTG
TTACATTTTGCCACGGAGCCATCTGAAATCTGGATTTTTATATGAAATACTGGGATTTTA
AAATATTAATGGTGAATTCAAATTAAAAAAAAAACCCTGTCATAAATATGCTGAAACAGG
TCTGCACCCTGAATTGAGAGGATGATTTTCTTCATTTTTATTTATTCGCATCAATCCCTC
TCCCCAGTGATGTGATGCTGTTTACAGAGATACCAGAAAACGTTATTGCAATTGAATGGA
GAAATCACGGAGAATATAAGGGGAAATTAAAATGAAGTCATGGATAAAGTTAATACACAA
AATGGCTGCAGTAAAAATTTGTGAGTTCTAAAGATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGCGGGTGAATCAACGCGGAGCCGAGACGTGACTTTGTCTTCCCGCCCCATCTGCGAAC
GGGCCGTGGACTGCTTGGACGACTGTCTAATGCAGGGGAACCTGGCTGAGACGCTTTAAT
AAATATTCTACGCTAAGTACCGTTCCACCTTCGGTTCAGAACTGACCTCAGTTCAACGCT
CCTTGTGCTCGTGGCGGTAATTCCTGGCGGCATCAGCCAACCAGGACCCAGACCTCTGCT
TCTTTTTTAAATCACCTATCGCCAGGGCCCAGCGCAGCGGAGAGGTCCAGTGAAGGTTTG
CAGAATGAATTGTGTCTGTTATTTCTACAACGTCTTTCAAAGAACGAAAAAGACGCGCGC
CCTCCTGTTTGTATTGCAGAATCCTGACGTTCCTTCCTTTTTTGGAACTCATTAGCAAAT
CTCTCAGGTAATATGAATGAGCAAAGTGGATGTGTGAGGATTTCTGTGACCACTGGAGAC
CGAAGTGGCGGCTTAAGGACTCATCTCGCCAGCATGTTGGTCCAGGGAGATAAGAACTTG
TTACATTTTGCCACGGAGCCATCTGAAATCTGGATTTTTATATGAAATACTGGGATTTTA
AAATATTAATGGTGAATTCAAATTAAAAAAAAAACCCTGTCATAAATATGCTGAAACAGG
TCTGCACCCTGAATTGAGAGGATGATTTTCTTCATTTTTATTTATTCGCATCAATCCCTC
TCCCCAGTGATGTGATGCTGTTTACAGAGATACCAGAAAACGTTATTGCAATTGAATGGA
GAAATCACGGAGAATATAAGGGGAAATTAAAATGAAGTCATGGATAAAGTTAATACACAA
AATGGCTGCAGTAAAAATTTGTGAGTTCTAAAGATG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               7-815, gnl|bosTau2|chr19 (4236274-4237118)
               

               
               7-815, gnl|Hg17|chr17 (53440120-53441737)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-815, gnl|bosTau2|chr19 (4236274-4237118)
               

               
               7-815, gnl|Hg17|chr17 (53440120-53441737)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	7-815, gnl\|bosTau2\|chr19 (4236274-4237118)
	7-815, gnl\|Hg17\|chr17 (53440120-53441737)