Non-Coding RNA Search

Ss1.1-Pig2-54G20.5

Sequence:


               
               CAAAAAGACAAAAATAAATAAATAAATAAATAAAGCAATCAGTAATAAGCATGGAGAATG
GAAGGAAGGTTTAAATGAGGACAATAGAAATACTGGGAGGAGGGAATGAGAAATGGTTTA
AGGAGAGGAACTTCAAAAATTTTAGGATGGCCTTAAGCACAATTGCTATTTTGCTAACAA
CTATCAGAATGTTTAAATGCTTTCATTCATGGTCCACTCTCAAATGACATTTATTATCCT
TTAGTAATTTTAAAAAATCATATTAAATTTTTCCATTCATTTTTATAATATAGAAAGGAA
ATAATACAAGATCCCATAATTGATAAAAATTTTTCAAATTTGCCCAATGTGTACAGTAAC
TTGTGGATCAACATGCTGCTAAATGCAGATTTAAAACATGACATCTGAGGATTAATGACT
TTTCCTCCTTTCTTGGAGCTCTTGGTATAAAATTCATCTGCTAATGTGAATCAGGTTTCT
ACATAGTTCATTTCATATTTAGTTATGAGGTAGTTTATTAATGTTTGCATGAGGTATGTC
TCAGTCTTTAATTTTAGGTAGTAGTGTTTATGGTTCACACATTCTCCTCTAAACAGAATG
CTGAATTATATCCTAATATTTCCATGTGTATTTTGTTGCCTTGATGTACTATATATATTT
GTTGCATGTATATTAAACATTTTGTACCATGCAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAAAAGACAAAAATAAATAAATAAATAAATAAAGCAATCAGTAATAAGCATGGAGAATG
GAAGGAAGGTTTAAATGAGGACAATAGAAATACTGGGAGGAGGGAATGAGAAATGGTTTA
AGGAGAGGAACTTCAAAAATTTTAGGATGGCCTTAAGCACAATTGCTATTTTGCTAACAA
CTATCAGAATGTTTAAATGCTTTCATTCATGGTCCACTCTCAAATGACATTTATTATCCT
TTAGTAATTTTAAAAAATCATATTAAATTTTTCCATTCATTTTTATAATATAGAAAGGAA
ATAATACAAGATCCCATAATTGATAAAAATTTTTCAAATTTGCCCAATGTGTACAGTAAC
TTGTGGATCAACATGCTGCTAAATGCAGATTTAAAACATGACATCTGAGGATTAATGACT
TTTCCTCCTTTCTTGGAGCTCTTGGTATAAAATTCATCTGCTAATGTGAATCAGGTTTCT
ACATAGTTCATTTCATATTTAGTTATGAGGTAGTTTATTAATGTTTGCATGAGGTATGTC
TCAGTCTTTAATTTTAGGTAGTAGTGTTTATGGTTCACACATTCTCCTCTAAACAGAATG
CTGAATTATATCCTAATATTTCCATGTGTATTTTGTTGCCTTGATGTACTATATATATTT
GTTGCATGTATATTAAACATTTTGTACCATGCAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               131-696, gnl|bosTau2|chr17 (8620432-8620977)
               

               
               131-696, gnl|Hg17|chr7 (87105718-87106262)
               

               
               131-696, gnl|Mm7|chr5 (8528512-8527990)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               131-696, gnl|bosTau2|chr17 (8620432-8620977)
               

               
               131-696, gnl|Hg17|chr7 (87105718-87106262)
               

               
               131-696, gnl|Mm7|chr5 (8528512-8527990)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	131-696, gnl\|bosTau2\|chr17 (8620432-8620977)
	131-696, gnl\|Hg17\|chr7 (87105718-87106262)
	131-696, gnl\|Mm7\|chr5 (8528512-8527990)