Non-Coding RNA Search

Ss1.1-Pig2-55K16.5

Sequence:


               
               ATTACACTTAAGAGGGAAAGCCATTTAGTCATCTGTCTTTTTTCCACTCAGCAGGAACCT
GAAAGATGTATAAGATCTTGAAAGTTTATCTAAATTCTAAAACTTTAAAAGGCAATTCTG
AGCTATTTTTATTTCCTAATATTTTGAGATAAAGTTTAGTTCTAGGGCTACGAGCCAGGA
CTGACCTTTTCTTTGTTTCTTTCTCTTTGTTCCACCCATGCTTTTGTAATTTGTCAGGTA
GACTTGACCAAAGTATATTACCATGCTGTGCCTTGGTTTCCCTTTTTGTAAAATGGGATT
AACAATACTTACCTACCTCACAGGGGTGTTGTGAGGCTCTAATCCTTTGCTCCTTCATTC
TTTCCTGTATTCTTTGTATGTCCAGCACTTTGTAGCCATGGGAGGAAAGGGACTATAAAA
GTATACATGTTAATGGAAGGATATGGTACCCAAAAGCCTTGTTAGAAAGCAAGGGTATGC
TACCTTGCTGTAAATACTCTAACTTTGTATTTGGAAATGTGAAATATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTACACTTAAGAGGGAAAGCCATTTAGTCATCTGTCTTTTTTCCACTCAGCAGGAACCT
GAAAGATGTATAAGATCTTGAAAGTTTATCTAAATTCTAAAACTTTAAAAGGCAATTCTG
AGCTATTTTTATTTCCTAATATTTTGAGATAAAGTTTAGTTCTAGGGCTACGAGCCAGGA
CTGACCTTTTCTTTGTTTCTTTCTCTTTGTTCCACCCATGCTTTTGTAATTTGTCAGGTA
GACTTGACCAAAGTATATTACCATGCTGTGCCTTGGTTTCCCTTTTTGTAAAATGGGATT
AACAATACTTACCTACCTCACAGGGGTGTTGTGAGGCTCTAATCCTTTGCTCCTTCATTC
TTTCCTGTATTCTTTGTATGTCCAGCACTTTGTAGCCATGGGAGGAAAGGGACTATAAAA
GTATACATGTTAATGGAAGGATATGGTACCCAAAAGCCTTGTTAGAAAGCAAGGGTATGC
TACCTTGCTGTAAATACTCTAACTTTGTATTTGGAAATGTGAAATATG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-526, gnl|bosTau2|chr16 (26605306-26605835)
               

               
               1-526, gnl|Hg17|chr1 (167438281-167438823)
               

               
               1-526, gnl|Mm7|chr1 (163208080-163207469)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-526, gnl|bosTau2|chr16 (26605306-26605835)
               

               
               1-526, gnl|Hg17|chr1 (167438281-167438823)
               

               
               1-526, gnl|Mm7|chr1 (163208080-163207469)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-526, gnl\|bosTau2\|chr16 (26605306-26605835)
	1-526, gnl\|Hg17\|chr1 (167438281-167438823)
	1-526, gnl\|Mm7\|chr1 (163208080-163207469)