Ss1.1-Pig2-57B21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCAAGCTGGAGGTTCTGCACTACCGGCTCAGTGTCTGCAGCGCCCTCCACAGCCCTGCCC AACCCAGCCTGCAGGCCCTCCACGCCCACCAAGAATCCTTCATGCCCAGCGAGGAGCATG TGCTGGCTGTGCGGCTGCTGCTGAAGCACCTGCACGCCTTCTCCAACAGCCTGAGGCCTG AGCAGGCCTCACCCTCCGCCCACTCCCACGCCGCCAGCCCCCTGGAGGAGTTCAAGCGGG CCGCTGTCCCAAGGTTTGTCCAGCAGAAGCTCTACCTCTTCCTGCAGCACTGCTTTGGCC ACTGGCCCCTGGATGCGTCATTCAGAGCTGTCCTAGAGATGTGGCTGAGCTACCTGCAGC CCTGGAGGTACGCACCTGAGAAGCAGGCCCTGAGCAGTGACAGCCAGGCCCGTGGCGTGT CGGAGAGATGGGCACCCTTTGTGCAGGAGAACCTGCTCATCTATACCAAGCTCTTCCTGG GCTTCCTGAGCCGAGCACTGCGCACTGACCTGGTCAGCCCTAAGAACG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCAAGCTGGAGGTTCTGCACTACCGGCTCAGTGTCTGCAGCGCCCTCCACAGCCCTGCCC AACCCAGCCTGCAGGCCCTCCACGCCCACCAAGAATCCTTCATGCCCAGCGAGGAGCATG TGCTGGCTGTGCGGCTGCTGCTGAAGCACCTGCACGCCTTCTCCAACAGCCTGAGGCCTG AGCAGGCCTCACCCTCCGCCCACTCCCACGCCGCCAGCCCCCTGGAGGAGTTCAAGCGGG CCGCTGTCCCAAGGTTTGTCCAGCAGAAGCTCTACCTCTTCCTGCAGCACTGCTTTGGCC ACTGGCCCCTGGATGCGTCATTCAGAGCTGTCCTAGAGATGTGGCTGAGCTACCTGCAGC CCTGGAGGTACGCACCTGAGAAGCAGGCCCTGAGCAGTGACAGCCAGGCCCGTGGCGTGT CGGAGAGATGGGCACCCTTTGTGCAGGAGAACCTGCTCATCTATACCAAGCTCTTCCTGG GCTTCCTGAGCCGAGCACTGCGCACTGACCTGGTCAGCCCTAAGAACG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 69-239, gnl|bosTau2|chr17 (45678650-45678820) | |
| 69-239, gnl|Hg17|chr2 (130631225-130631053) | |
| 69-239, gnl|Mm7|chr16 (17188204-17188375) | |
| 330-431, gnl|bosTau2|chr17 (45679385-45679486) | |
| 330-431, gnl|canFam2|chr26 (33467301-33467408) | |
| 330-431, gnl|canFam2|chr26 (33467299-33467410) | |
| 330-431, gnl|danRer3|chr21 (9470902-9470798) | |
| 330-431, gnl|danRer3|chr21 (9470902-9470798) | |
| 330-431, gnl|echTel1|scaffold_214908 (3484-3377) | |
| 330-431, gnl|echTel1|scaffold_214908 (3486-3376) | |
| 330-431, gnl|galGal2|chr15 (8267267-8267374) | |
| 330-431, gnl|galGal2|chr15 (8267267-8267374) | |
| 330-431, gnl|hg17|chr2 (130629832-130629942) | |
| 330-431, gnl|Hg17|chr2 (130629938-130629837) | |
| 330-431, gnl|hg17|chr22 (19285015-19285120) | |
| 330-431, gnl|loxAfr1|scaffold_11849 (59516-59409) | |
| 330-431, gnl|loxAfr1|scaffold_11849 (59518-59409) | |
| 330-431, gnl|mm7|chr16 (17189584-17189477) | |
| 330-431, gnl|mm7|chr16 (17189586-17189476) | |
| 330-431, gnl|Mm7|chr16 (17189478-17189579) | |
| 330-431, gnl|monDom2|scaffold_112 (3466879-3466986) | |
| 330-431, gnl|monDom2|scaffold_112 (3466905-3466987) | |
| 330-431, gnl|oryCun1|scaffold_172981 (36749-36642) | |
| 330-431, gnl|oryCun1|scaffold_172981 (36751-36640) | |
| 330-431, gnl|panTro1|chr13 (18052149-18052062) | |
| 330-431, gnl|panTro1|chr13 (18052151-18052041) | |
| 330-431, gnl|rheMac2|chr10 (64701861-64701966) | |
| 330-431, gnl|rheMac2|chr13 (136643622-136643732) | |
| 330-431, gnl|rn3|chr11 (85396753-85396860) | |
| 330-431, gnl|rn3|chr11 (85396751-85396861) | |
| 330-431, gnl|xenTro1|scaffold_169 (755199-755089) | |
| 330-431, gnl|xenTro1|scaffold_169 (755200-755089) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 69-239, gnl|bosTau2|chr17 (45678650-45678820) | |
| 69-239, gnl|Hg17|chr2 (130631225-130631053) | |
| 69-239, gnl|Mm7|chr16 (17188204-17188375) | |
| 330-431, gnl|bosTau2|chr17 (45679385-45679486) | |
| 330-431, gnl|canFam2|chr26 (33467301-33467408) | |
| 330-431, gnl|canFam2|chr26 (33467299-33467410) | |
| 330-431, gnl|danRer3|chr21 (9470902-9470798) | |
| 330-431, gnl|danRer3|chr21 (9470902-9470798) | |
| 330-431, gnl|echTel1|scaffold_214908 (3484-3377) | |
| 330-431, gnl|echTel1|scaffold_214908 (3486-3376) | |
| 330-431, gnl|galGal2|chr15 (8267267-8267374) | |
| 330-431, gnl|galGal2|chr15 (8267267-8267374) | |
| 330-431, gnl|hg17|chr2 (130629832-130629942) | |
| 330-431, gnl|Hg17|chr2 (130629938-130629837) | |
| 330-431, gnl|hg17|chr22 (19285015-19285120) | |
| 330-431, gnl|loxAfr1|scaffold_11849 (59516-59409) | |
| 330-431, gnl|loxAfr1|scaffold_11849 (59518-59409) | |
| 330-431, gnl|mm7|chr16 (17189584-17189477) | |
| 330-431, gnl|mm7|chr16 (17189586-17189476) | |
| 330-431, gnl|Mm7|chr16 (17189478-17189579) | |
| 330-431, gnl|monDom2|scaffold_112 (3466879-3466986) | |
| 330-431, gnl|monDom2|scaffold_112 (3466905-3466987) | |
| 330-431, gnl|oryCun1|scaffold_172981 (36749-36642) | |
| 330-431, gnl|oryCun1|scaffold_172981 (36751-36640) | |
| 330-431, gnl|panTro1|chr13 (18052149-18052062) | |
| 330-431, gnl|panTro1|chr13 (18052151-18052041) | |
| 330-431, gnl|rheMac2|chr10 (64701861-64701966) | |
| 330-431, gnl|rheMac2|chr13 (136643622-136643732) | |
| 330-431, gnl|rn3|chr11 (85396753-85396860) | |
| 330-431, gnl|rn3|chr11 (85396751-85396861) | |
| 330-431, gnl|xenTro1|scaffold_169 (755199-755089) | |
| 330-431, gnl|xenTro1|scaffold_169 (755200-755089) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) | |
| cty (0.10408) |