Ss1.1-Pig2-58I04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGAGGGAGCTGAAGAGACGCCCGAAGTCCCTGGCCCCATTTCTGCCAACATCACCATGGC CACCAGGAAGGAGCTTGAGGAGATGATAGAAAACCTCGAGCCACACATCGATGACCCCGA CGTGAAAGCGCAGGTGGACGTGCTGGCCGCTGCCCTGCGCGCCTCCAGCCTGGATGCCCG CGACGAGGCCTCTGAAGCCACCAGGAGGGCCACTCAGGACGAGCCGGCTACTGGCGAGCC CCCTGGCTGTGGACTGGGCCACGATGCCACCGGGCCACTCATCAGCGATGCTGTTGAGAC CCTGGACTCCGCCCTGTGCTACATTCGAGATGATTCGGACTTGAGCAGCAACAGCGGTTT TAGTCCTGATGAGGAAAGGCGATCTAAAGTGCAGGACGTGGTGCCCCAGGCCTTGCTGGA TCAGTATCTGTCCATGACCGACCCCTCCCGGGCACAGACGGTGGACACAGAGATCGCCAA GCACTGCGCCTACAGCCTCCCGGGTGTGGCACTGACGCTGGGCCGGCAGAACTGGCACTG CCTCAGGGAGACCTACGAGGCCCTGGCCTCTGACATGCAGTGGAAGGTTCGGCGAACACT GGCCTTCTCCATCCACGAGCTTGCCGTCATCCTTGGAGATCAGTTGACAGCTGCAGATTT GGTTCCAATTTTTAATGGATTTTTAAAAGACCTCGATGAGGTCAGAATAGGTGTCCTTAA ACACTTGCACGATTTTCTGAAGCTTCTTCATATTGACAAAAGAAGAGAATATCTCTATCA ACTTCAGGAGTTTTTGGTGACAGATAATAGTCGAAATTGGCGCTTTCGAGCCGAGCTGGC TGAACAGCTGATCTTACTCCTGGAACTGTACAGCCCCAGAGATGTCTATGACTATTTGCG CCCCATTGCCCTGAACCTGTGTGCAGATAAAGTGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGAGGGAGCTGAAGAGACGCCCGAAGTCCCTGGCCCCATTTCTGCCAACATCACCATGGC CACCAGGAAGGAGCTTGAGGAGATGATAGAAAACCTCGAGCCACACATCGATGACCCCGA CGTGAAAGCGCAGGTGGACGTGCTGGCCGCTGCCCTGCGCGCCTCCAGCCTGGATGCCCG CGACGAGGCCTCTGAAGCCACCAGGAGGGCCACTCAGGACGAGCCGGCTACTGGCGAGCC CCCTGGCTGTGGACTGGGCCACGATGCCACCGGGCCACTCATCAGCGATGCTGTTGAGAC CCTGGACTCCGCCCTGTGCTACATTCGAGATGATTCGGACTTGAGCAGCAACAGCGGTTT TAGTCCTGATGAGGAAAGGCGATCTAAAGTGCAGGACGTGGTGCCCCAGGCCTTGCTGGA TCAGTATCTGTCCATGACCGACCCCTCCCGGGCACAGACGGTGGACACAGAGATCGCCAA GCACTGCGCCTACAGCCTCCCGGGTGTGGCACTGACGCTGGGCCGGCAGAACTGGCACTG CCTCAGGGAGACCTACGAGGCCCTGGCCTCTGACATGCAGTGGAAGGTTCGGCGAACACT GGCCTTCTCCATCCACGAGCTTGCCGTCATCCTTGGAGATCAGTTGACAGCTGCAGATTT GGTTCCAATTTTTAATGGATTTTTAAAAGACCTCGATGAGGTCAGAATAGGTGTCCTTAA ACACTTGCACGATTTTCTGAAGCTTCTTCATATTGACAAAAGAAGAGAATATCTCTATCA ACTTCAGGAGTTTTTGGTGACAGATAATAGTCGAAATTGGCGCTTTCGAGCCGAGCTGGC TGAACAGCTGATCTTACTCCTGGAACTGTACAGCCCCAGAGATGTCTATGACTATTTGCG CCCCATTGCCCTGAACCTGTGTGCAGATAAAGTGTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 5-128, gnl|bosTau2|chr24 (31737969-31738093) | |
| 5-128, gnl|canFam2|chr7 (78587128-78587260) | |
| 5-128, gnl|danRer3|chr23 (27312958-27312838) | |
| 5-128, gnl|dasNov1|scaffold_57472 (1070-1202) | |
| 5-128, gnl|echTel1|scaffold_195179 (1126-1257) | |
| 5-128, gnl|fr1|chrUn (115296223-115296100) | |
| 5-128, gnl|galGal2|chrUn (116519933-116520059) | |
| 5-128, gnl|hg17|chr18 (9560150-9560282) | |
| 5-128, gnl|Hg17|chr18 (9560279-9560155) | |
| 5-128, gnl|loxAfr1|scaffold_105802 (993-1125) | |
| 5-128, gnl|mm7|chr17 (64042329-64042197) | |
| 5-128, gnl|Mm7|chr17 (64042198-64042322) | |
| 5-128, gnl|monDom2|scaffold_21 (23190058-23189926) | |
| 5-128, gnl|oryCun1|scaffold_201200 (43620-43745) | |
| 5-128, gnl|panTro1|chr17 (3103741-3103609) | |
| 5-128, gnl|rheMac2|chr18 (4885859-4885727) | |
| 5-128, gnl|rn3|chr9 (104802744-104802612) | |
| 5-128, gnl|xenTro1|scaffold_333 (949134-949016) | |
| 580-742, gnl|bosTau2|chr13 (39427395-39427557) | |
| 580-742, gnl|canFam2|chr24 (46016649-46016828) | |
| 580-742, gnl|danRer3|chr6 (31673734-31673566) | |
| 580-742, gnl|dasNov1|scaffold_12582 (28465-28284) | |
| 580-742, gnl|echTel1|scaffold_248572 (4127-4311) | |
| 580-742, gnl|fr1|chrUn (115297785-115297617) | |
| 580-742, gnl|galGal2|chr20 (10762382-10762205) | |
| 580-742, gnl|hg17|chr20 (56247686-56247867) | |
| 580-742, gnl|Hg17|chr20 (56247865-56247703) | |
| 580-742, gnl|loxAfr1|scaffold_6844 (6649-6829) | |
| 580-742, gnl|mm7|chr2 (173333528-173333685) | |
| 580-742, gnl|Mm7|chr2 (173333685-173333523) | |
| 580-742, gnl|monDom2|scaffold_1 (172688696-172688867) | |
| 580-742, gnl|oryCun1|scaffold_201200 (43040-43201) | |
| 580-742, gnl|panTro1|chr21 (59182335-59182516) | |
| 580-742, gnl|rheMac2|chr10 (6289551-6289370) | |
| 580-742, gnl|rn3|chr3 (164387125-164387294) | |
| 580-742, gnl|tetNig1|chr11 (7369003-7369171) | |
| 580-742, gnl|xenTro1|scaffold_1348 (147461-147297) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-128, gnl|bosTau2|chr24 (31737969-31738093) | |
| 5-128, gnl|canFam2|chr7 (78587128-78587260) | |
| 5-128, gnl|danRer3|chr23 (27312958-27312838) | |
| 5-128, gnl|dasNov1|scaffold_57472 (1070-1202) | |
| 5-128, gnl|echTel1|scaffold_195179 (1126-1257) | |
| 5-128, gnl|fr1|chrUn (115296223-115296100) | |
| 5-128, gnl|galGal2|chrUn (116519933-116520059) | |
| 5-128, gnl|hg17|chr18 (9560150-9560282) | |
| 5-128, gnl|Hg17|chr18 (9560279-9560155) | |
| 5-128, gnl|loxAfr1|scaffold_105802 (993-1125) | |
| 5-128, gnl|mm7|chr17 (64042329-64042197) | |
| 5-128, gnl|Mm7|chr17 (64042198-64042322) | |
| 5-128, gnl|monDom2|scaffold_21 (23190058-23189926) | |
| 5-128, gnl|oryCun1|scaffold_201200 (43620-43745) | |
| 5-128, gnl|panTro1|chr17 (3103741-3103609) | |
| 5-128, gnl|rheMac2|chr18 (4885859-4885727) | |
| 5-128, gnl|rn3|chr9 (104802744-104802612) | |
| 5-128, gnl|xenTro1|scaffold_333 (949134-949016) | |
| 580-742, gnl|bosTau2|chr13 (39427395-39427557) | |
| 580-742, gnl|canFam2|chr24 (46016649-46016828) | |
| 580-742, gnl|danRer3|chr6 (31673734-31673566) | |
| 580-742, gnl|dasNov1|scaffold_12582 (28465-28284) | |
| 580-742, gnl|echTel1|scaffold_248572 (4127-4311) | |
| 580-742, gnl|fr1|chrUn (115297785-115297617) | |
| 580-742, gnl|galGal2|chr20 (10762382-10762205) | |
| 580-742, gnl|hg17|chr20 (56247686-56247867) | |
| 580-742, gnl|Hg17|chr20 (56247865-56247703) | |
| 580-742, gnl|loxAfr1|scaffold_6844 (6649-6829) | |
| 580-742, gnl|mm7|chr2 (173333528-173333685) | |
| 580-742, gnl|Mm7|chr2 (173333685-173333523) | |
| 580-742, gnl|monDom2|scaffold_1 (172688696-172688867) | |
| 580-742, gnl|oryCun1|scaffold_201200 (43040-43201) | |
| 580-742, gnl|panTro1|chr21 (59182335-59182516) | |
| 580-742, gnl|rheMac2|chr10 (6289551-6289370) | |
| 580-742, gnl|rn3|chr3 (164387125-164387294) | |
| 580-742, gnl|tetNig1|chr11 (7369003-7369171) | |
| 580-742, gnl|xenTro1|scaffold_1348 (147461-147297) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ecc (0.115035) | |
| jej (0.0989218) |