Non-Coding RNA Search

Ss1.1-Pig2-59D23.5

Sequence:


               
               ATTGCCTTGTCCCTGCAGCAGCAGCAGCCGCCACCTCAAGGCACATCGGGTCTTAGCGAC
CTGGAGCTGGCCCAGCAGCTTCAGCAAGAGGAGTACCAACAGCACCAAGCAGCCCAGCCT
GTTCCAGCACTGGCCCCATCGCTGCAGGGAAGAGGAGCCACGTCTGGACGCCCAGCTGCC
GAGCGTCGGCAAAGGCCGAAGCAAGAGTCTGACTGTGTCCTCCTGTAGCCCCACTCAATG
CCAGGCTGCCTTGCCTCCGCGTTCAAGGACTGGGGCTATTTCGCTCGCTTCTCTAGCTCA
GCTTGAGATATGCAGGGTAACTTATTTATGGAATGTTGGGGATTTACCAGGCAGTAAATG
CCAAGGTCAGATTTAGTGATATCCTTGCCTTCACATGCTGACTCCTCTCAACCATCCAGG
GCCACACTGGGGTTGGTGGGGTAAGGATTTCTGATTCCCAGTTCCCTTTGCCCAACACAG
TCACGTGAATATACACTCAGGCTCCAGGGTGAAGTCTCTGTCTCCACACATCTCCCTTAC
TTCCCACCCCTGACTGGCTGGGTCATCCTGGCTCTCCTGCAGGCCCCTCTGTATCTGTTT
CAGGGTTTGAGTTCAGTTTCTAACTGCATTATTTGTAATGCCTTCCTAGGAGTTTGGAAA
TAAAACTTCTTTCCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGCCTTGTCCCTGCAGCAGCAGCAGCCGCCACCTCAAGGCACATCGGGTCTTAGCGAC
CTGGAGCTGGCCCAGCAGCTTCAGCAAGAGGAGTACCAACAGCACCAAGCAGCCCAGCCT
GTTCCAGCACTGGCCCCATCGCTGCAGGGAAGAGGAGCCACGTCTGGACGCCCAGCTGCC
GAGCGTCGGCAAAGGCCGAAGCAAGAGTCTGACTGTGTCCTCCTGTAGCCCCACTCAATG
CCAGGCTGCCTTGCCTCCGCGTTCAAGGACTGGGGCTATTTCGCTCGCTTCTCTAGCTCA
GCTTGAGATATGCAGGGTAACTTATTTATGGAATGTTGGGGATTTACCAGGCAGTAAATG
CCAAGGTCAGATTTAGTGATATCCTTGCCTTCACATGCTGACTCCTCTCAACCATCCAGG
GCCACACTGGGGTTGGTGGGGTAAGGATTTCTGATTCCCAGTTCCCTTTGCCCAACACAG
TCACGTGAATATACACTCAGGCTCCAGGGTGAAGTCTCTGTCTCCACACATCTCCCTTAC
TTCCCACCCCTGACTGGCTGGGTCATCCTGGCTCTCCTGCAGGCCCCTCTGTATCTGTTT
CAGGGTTTGAGTTCAGTTTCTAACTGCATTATTTGTAATGCCTTCCTAGGAGTTTGGAAA
TAAAACTTCTTTCCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               Q91VW2_MOUSE

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               Q91VW2_MOUSE

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               145-678, gnl|bosTau2|chr3 (16560391-16560936)
               

               
               145-678, gnl|Hg17|chr1 (147782919-147782084)
               

               
               145-678, gnl|Mm7|chr3 (95169597-95170114)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               145-678, gnl|bosTau2|chr3 (16560391-16560936)
               

               
               145-678, gnl|Hg17|chr1 (147782919-147782084)
               

               
               145-678, gnl|Mm7|chr3 (95169597-95170114)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               fhi (0.339155)
               

               
               nmm (0.132802)
               

               
               eru (0.120048)
               

               
               pgl (0.118483)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.339155)
               

               
               nmm (0.132802)
               

               
               eru (0.120048)
               

               
               pgl (0.118483)

	145-678, gnl\|bosTau2\|chr3 (16560391-16560936)
	145-678, gnl\|Hg17\|chr1 (147782919-147782084)
	145-678, gnl\|Mm7\|chr3 (95169597-95170114)