Ss1.1-Pig2-5O13.5
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
GCCGCCGAGTACAACATCTTTGAAGGGATGGAGCTGCGCGGGGCTCCTCTGGTGGTCATC TGCCAGGGCAAGATCATGCTGGAAGACGGCAACCTGCACGTGACCCAGGGCGCCGGCCGC TTCATCCCCTGCAGCCCCTTCTCGGACTATGTCTACAAGCGCATTAAAGCCCGGAGGAAG ATGGCGGACCTGCACGCGGTGCCCAGGGGCATGTATGATGGGCCAGTGTTTGACCTGACC ACCACGCCCAAGGGGGGCACCCCTGCCGGCTCCACCCGGGGCTCTCCCACGCGGCCCAAC CCGCCTGTGAGGAACCTCCATCAGTCGGGATTTAGCCTGTCAGGCACCCAAGTGGATGAG GGGGTCCGCTCCGCCAGCAAGCGCATCGTGGCGCCCCCTGGAGGCCGTTCGAACATCACA TCCCTGAGCTAAGCCACCCTTCCCGGAAGAGAGGGGCAGAAGCAAGAAGAGATTCTTTTG AAGCCAAAATGGTACACCACTATTTAAGAAGGAAAGCGAATCCAAACAGTTTCGAGCTAA AGAATCAATAAGCCTCAAGCCTTATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTA CGAATATCGCTTTGTTTTCGGTTTATGCTTAGCCTAATGGGGGTTGGAACCCCCTCCCCC CACTTTCATGCATGCAATCAGGCC |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
GCCGCCGAGTACAACATCTTTGAAGGGATGGAGCTGCGCGGGGCTCCTCTGGTGGTCATC TGCCAGGGCAAGATCATGCTGGAAGACGGCAACCTGCACGTGACCCAGGGCGCCGGCCGC TTCATCCCCTGCAGCCCCTTCTCGGACTATGTCTACAAGCGCATTAAAGCCCGGAGGAAG ATGGCGGACCTGCACGCGGTGCCCAGGGGCATGTATGATGGGCCAGTGTTTGACCTGACC ACCACGCCCAAGGGGGGCACCCCTGCCGGCTCCACCCGGGGCTCTCCCACGCGGCCCAAC CCGCCTGTGAGGAACCTCCATCAGTCGGGATTTAGCCTGTCAGGCACCCAAGTGGATGAG GGGGTCCGCTCCGCCAGCAAGCGCATCGTGGCGCCCCCTGGAGGCCGTTCGAACATCACA TCCCTGAGCTAAGCCACCCTTCCCGGAAGAGAGGGGCAGAAGCAAGAAGAGATTCTTTTG AAGCCAAAATGGTACACCACTATTTAAGAAGGAAAGCGAATCCAAACAGTTTCGAGCTAA AGAATCAATAAGCCTCAAGCCTTATGTTTCTCCAATGTTACGCTCGCTTGCCTAGCTTTA CGAATATCGCTTTGTTTTCGGTTTATGCTTAGCCTAATGGGGGTTGGAACCCCCTCCCCC CACTTTCATGCATGCAATCAGGCC |
Coded protein: 1 entry(ies) | More info |
Aligned organism(s): 22 entry(ies) | More info |
Aligned organism(s): 22 entry(ies) | Help | Less info |
1-183, gnl|bosTau2|chr7 (40026711-40026529) | |
1-183, gnl|canFam2|chr2 (44542883-44543092) | |
1-183, gnl|danRer3|chr21 (39907367-39907166) | |
1-183, gnl|dasNov1|scaffold_862 (103343-103555) | |
1-183, gnl|echTel1|scaffold_281866 (1236-1448) | |
1-183, gnl|fr1|chrUn (144421008-144421211) | |
1-183, gnl|galGal2|chr13 (17013759-17013964) | |
1-183, gnl|hg17|chr5 (146757410-146757621) | |
1-183, gnl|Hg17|chr5 (146757601-146757419) | |
1-183, gnl|loxAfr1|scaffold_682 (81067-81279) | |
1-183, gnl|mm7|chr18 (43705584-43705794) | |
1-183, gnl|Mm7|chr18 (43705775-43705593) | |
1-183, gnl|monDom2|scaffold_6 (58817564-58817352) | |
1-183, gnl|oryCun1|scaffold_213870 (159217-159419) | |
1-183, gnl|panTro1|chr4 (153610286-153610497) | |
1-183, gnl|rheMac2|chr6 (143854714-143854925) | |
1-183, gnl|rn3|chr18 (36659765-36659975) | |
1-183, gnl|tetNig1|chr4 (5981832-5982033) | |
1-183, gnl|xenTro1|scaffold_21 (325049-325268) | |
336-684, gnl|bosTau2|chr7 (40021542-40021194) | |
336-684, gnl|Hg17|chr5 (146753886-146753536) | |
336-684, gnl|Mm7|chr18 (43701698-43701343) |
Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
1-183, gnl|bosTau2|chr7 (40026711-40026529) | |
1-183, gnl|canFam2|chr2 (44542883-44543092) | |
1-183, gnl|danRer3|chr21 (39907367-39907166) | |
1-183, gnl|dasNov1|scaffold_862 (103343-103555) | |
1-183, gnl|echTel1|scaffold_281866 (1236-1448) | |
1-183, gnl|fr1|chrUn (144421008-144421211) | |
1-183, gnl|galGal2|chr13 (17013759-17013964) | |
1-183, gnl|hg17|chr5 (146757410-146757621) | |
1-183, gnl|Hg17|chr5 (146757601-146757419) | |
1-183, gnl|loxAfr1|scaffold_682 (81067-81279) | |
1-183, gnl|mm7|chr18 (43705584-43705794) | |
1-183, gnl|Mm7|chr18 (43705775-43705593) | |
1-183, gnl|monDom2|scaffold_6 (58817564-58817352) | |
1-183, gnl|oryCun1|scaffold_213870 (159217-159419) | |
1-183, gnl|panTro1|chr4 (153610286-153610497) | |
1-183, gnl|rheMac2|chr6 (143854714-143854925) | |
1-183, gnl|rn3|chr18 (36659765-36659975) | |
1-183, gnl|tetNig1|chr4 (5981832-5982033) | |
1-183, gnl|xenTro1|scaffold_21 (325049-325268) | |
336-684, gnl|bosTau2|chr7 (40021542-40021194) | |
336-684, gnl|Hg17|chr5 (146753886-146753536) | |
336-684, gnl|Mm7|chr18 (43701698-43701343) |
Expressed library(ies): 2 entry(ies) | More info |
Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
nco (0.161734) | |
eep (0.122564) |