Non-Coding RNA Search

Ss1.1-Pig2-60A24.5

Sequence:


               
               TTGCAGCAGATTCAGTAACCAGACCTCTTGCTTCCCCTCAGTGACAAGTATGCTGTGAAT
TCAACCTTTGGACTTGCTGCCCAAGCCTTTGGTTGCTGCCCTGACTATAGTAAGAGGTAA
ACTTAACCTGGTTTATCCGAGAATGACCATTTTCCTAATGTGAAAACCATCTCTCTCACC
ACTTTTATTAGTAGGGCTAACATTTTTTTCCGTTATAAATGGTTGAGCAATTTGAATGAC
TTAACACAGTGTCATTATCTTGCAATATAAACTGGTAACCTCACGACTCCACACTTCATC
ACCACATGAAGTAAATGAAGCTAGCTAAGCGGATGCTGTATCAACTAGTAACTTGCCATT
AAGGATTATTTTATAGCATGAATTTTAAGACTATTTATTCAAATGATATTTTACTCTTGT
ATTCATTTTGTTTTAGATTTGTGACATGAATATTTCAGTGCTGCTTAATTTTGTTCTGAA
TTCTTGTTTCTTGCTTGTAAATGGCTTTTTTATGGTATAAAGTCAATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGCAGCAGATTCAGTAACCAGACCTCTTGCTTCCCCTCAGTGACAAGTATGCTGTGAAT
TCAACCTTTGGACTTGCTGCCCAAGCCTTTGGTTGCTGCCCTGACTATAGTAAGAGGTAA
ACTTAACCTGGTTTATCCGAGAATGACCATTTTCCTAATGTGAAAACCATCTCTCTCACC
ACTTTTATTAGTAGGGCTAACATTTTTTTCCGTTATAAATGGTTGAGCAATTTGAATGAC
TTAACACAGTGTCATTATCTTGCAATATAAACTGGTAACCTCACGACTCCACACTTCATC
ACCACATGAAGTAAATGAAGCTAGCTAAGCGGATGCTGTATCAACTAGTAACTTGCCATT
AAGGATTATTTTATAGCATGAATTTTAAGACTATTTATTCAAATGATATTTTACTCTTGT
ATTCATTTTGTTTTAGATTTGTGACATGAATATTTCAGTGCTGCTTAATTTTGTTCTGAA
TTCTTGTTTCTTGCTTGTAAATGGCTTTTTTATGGTATAAAGTCAATG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-528, gnl|bosTau2|chr11 (75072205-75071678)
               

               
               1-528, gnl|Hg17|chr9 (126727129-126727672)
               

               
               1-528, gnl|Mm7|chr2 (33413993-33413458)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-528, gnl|bosTau2|chr11 (75072205-75071678)
               

               
               1-528, gnl|Hg17|chr9 (126727129-126727672)
               

               
               1-528, gnl|Mm7|chr2 (33413993-33413458)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               jej (0.197844)
               

               
               mga (0.160205)
               

               
               fat (0.147427)
               

               
               thg (0.126791)
               

               
               spc (0.113366)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.197844)
               

               
               mga (0.160205)
               

               
               fat (0.147427)
               

               
               thg (0.126791)
               

               
               spc (0.113366)

	1-528, gnl\|bosTau2\|chr11 (75072205-75071678)
	1-528, gnl\|Hg17\|chr9 (126727129-126727672)
	1-528, gnl\|Mm7\|chr2 (33413993-33413458)

	jej (0.197844)
	mga (0.160205)
	fat (0.147427)
	thg (0.126791)
	spc (0.113366)