Non-Coding RNA Search

Ss1.1-Pig2-60D22.5

Sequence:


               
               GTCCCAGCAGTCGAGCACTGCTTCTGCAAAGACTGCCCTTGTGCCCAAGAGTTCTTCCTA
AACTACCTCAGAAAGTGGCATTAAGGAAAACAGAAACCAGCCATCATCTCTCCCTCGACA
AAGCCGGCGTCCCGCCCGAGATCTTCCAGAAATCATCCCAGTTGGCAGAGTTACCCCTGA
AGCCACCACCTGGAGACCTGCCCCCGAAGCCCACGGAACTGGCTCCCAAACCCCAAATTG
GAGACTTGCCACCTAAGCCAGGAGAGCTGCCCCCCAAGCCGCAGCTGGGTAGGTACCAGC
GCGCCGCTGCCACGTCGGGGGAGCGCATGCGCAGCGCCCGCGCTTTACCCTGCTGATCAA
ACAGCAGCCCGCGAGCTCTGGGTGTGTTCCGGTTTTTCAGATGTAGGACGGGCGCTCCTG
TGCGTCCTAGCGAGCTCTGCCCAGGCCTTAATCGGGCCCTCAGGTCTCTCCCTGTCAAGT
GGGACACGTGCATCCTCATGTGACTTCGGGAGACGGTGGGAGGAGAGTCTTTCTGAAAGC
TCCTTTTCCATGAAAACCTGCTGTCCAGGTGTCGGGAGGGAAAGGCCTTGTGCTCCCACA
AGGAGGGAGGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCCCAGCAGTCGAGCACTGCTTCTGCAAAGACTGCCCTTGTGCCCAAGAGTTCTTCCTA
AACTACCTCAGAAAGTGGCATTAAGGAAAACAGAAACCAGCCATCATCTCTCCCTCGACA
AAGCCGGCGTCCCGCCCGAGATCTTCCAGAAATCATCCCAGTTGGCAGAGTTACCCCTGA
AGCCACCACCTGGAGACCTGCCCCCGAAGCCCACGGAACTGGCTCCCAAACCCCAAATTG
GAGACTTGCCACCTAAGCCAGGAGAGCTGCCCCCCAAGCCGCAGCTGGGTAGGTACCAGC
GCGCCGCTGCCACGTCGGGGGAGCGCATGCGCAGCGCCCGCGCTTTACCCTGCTGATCAA
ACAGCAGCCCGCGAGCTCTGGGTGTGTTCCGGTTTTTCAGATGTAGGACGGGCGCTCCTG
TGCGTCCTAGCGAGCTCTGCCCAGGCCTTAATCGGGCCCTCAGGTCTCTCCCTGTCAAGT
GGGACACGTGCATCCTCATGTGACTTCGGGAGACGGTGGGAGGAGAGTCTTTCTGAAAGC
TCCTTTTCCATGAAAACCTGCTGTCCAGGTGTCGGGAGGGAAAGGCCTTGTGCTCCCACA
AGGAGGGAGGGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               74-289, gnl|bosTau2|chr14 (6111682-6111897)
               

               
               74-289, gnl|Hg17|chr8 (131142499-131142293)
               

               
               74-289, gnl|Mm7|chr15 (64170121-64169906)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               74-289, gnl|bosTau2|chr14 (6111682-6111897)
               

               
               74-289, gnl|Hg17|chr8 (131142499-131142293)
               

               
               74-289, gnl|Mm7|chr15 (64170121-64169906)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ton (0.1755)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (0.1755)

	74-289, gnl\|bosTau2\|chr14 (6111682-6111897)
	74-289, gnl\|Hg17\|chr8 (131142499-131142293)
	74-289, gnl\|Mm7\|chr15 (64170121-64169906)