Non-Coding RNA Search

Ss1.1-Pig2-63B12.5

Sequence:


               
               ACGGGGCCATCAGTCGAACAGATGCCGAGAACCTGCTCCGGCTGTGCAAGGAAGCCAGCT
ACCTGGTGCGCAACAGTGAGACCAGCAAGAATGACTTCTCCCTGTCCCTCAAGAGCAGTC
AGGGCTTCATGCACATGAAGCTGTCCCGGACCAAGGAACACAAGTACGTGCTGGGCCAGA
ACAGCCCGCCCTTCAGCAGCGTCCCTGAAATCGTGCACCACTACGCCAGCCGCAAGCTGC
CCATTAAGGGGGCTGAGCACATGTCCCTGCTCTACCCCGTGGCCATCCGGACTCTGTAGG
TGTGAGGCATGGACACTGTGACAGATCCGGACTCAGCCCTGTGCTCATCCCCTGCCTAAG
GGCTGTGGCCCTTTTTGGGCCCCAAGATCTCATACCTTTCTTCCCCCGTGCTTGGAATAC
TGGAAGGTGGAGATTCCTTAATTTATTCTAAAGGGGAAGGGCTACGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACGGGGCCATCAGTCGAACAGATGCCGAGAACCTGCTCCGGCTGTGCAAGGAAGCCAGCT
ACCTGGTGCGCAACAGTGAGACCAGCAAGAATGACTTCTCCCTGTCCCTCAAGAGCAGTC
AGGGCTTCATGCACATGAAGCTGTCCCGGACCAAGGAACACAAGTACGTGCTGGGCCAGA
ACAGCCCGCCCTTCAGCAGCGTCCCTGAAATCGTGCACCACTACGCCAGCCGCAAGCTGC
CCATTAAGGGGGCTGAGCACATGTCCCTGCTCTACCCCGTGGCCATCCGGACTCTGTAGG
TGTGAGGCATGGACACTGTGACAGATCCGGACTCAGCCCTGTGCTCATCCCCTGCCTAAG
GGCTGTGGCCCTTTTTGGGCCCCAAGATCTCATACCTTTCTTCCCCCGTGCTTGGAATAC
TGGAAGGTGGAGATTCCTTAATTTATTCTAAAGGGGAAGGGCTACGGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               101-344, gnl|bosTau2|chr10 (45012423-45012665)
               

               
               101-344, gnl|Hg17|chr15 (43247634-43247392)
               

               
               101-344, gnl|Mm7|chr2 (122090403-122090144)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               101-344, gnl|bosTau2|chr10 (45012423-45012665)
               

               
               101-344, gnl|Hg17|chr15 (43247634-43247392)
               

               
               101-344, gnl|Mm7|chr2 (122090403-122090144)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ece (0.229305)
               

               
               ebs (0.118301)
               

               
               jca (0.11396)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               ebs (0.118301)
               

               
               jca (0.11396)

	101-344, gnl\|bosTau2\|chr10 (45012423-45012665)
	101-344, gnl\|Hg17\|chr15 (43247634-43247392)
	101-344, gnl\|Mm7\|chr2 (122090403-122090144)