Ss1.1-Pig2-63D24.5
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GACCGGATGAATCGCGGCCGGGACCAGGTGGACCAGCTGAGGACAGAGCTCATGCAGGAG
AGGTCTGCTCGGCAGGACCTGGAGTGTGACAAAATCTCCTTGGAGAGACAGAACAAGGAC
TTGAAGAGCCGGTTGGCCAGCTCAGAAGGCTTCCAAAAGCCCAGCGCCAGCCTTTCTCAG
CTCGAGTCCCTGAATCGGGAGTTGCAGGAGCGGCTCCAGGCTGAAGAGAGGGAGAAGACA
GTTCTGCAGTCCACCAACCGAAAATTGGAGCGGAGAGTTAAAGAGCTGTCCATCCAGATT
GATGATGAGCGGCAACACGTCAATGACCAGAAAGACCAGCCTGAGGGTGAAGGCTTTGAA
GCGGCAGGTGGATGAAGCAGAAGAGGAAATTGAGCGCCTGGATGGCCTGAGGAAGAAGGC
CCAGCGTGAGCTGGAGGAACAACATGAGGTCAATGAACAGCTCCAGGCCCGGATCAAAGC
CCTGGAGAAGGACTCCTGGCGCAAAGCGTCTCGCTCAGCTGCTGAGTCAACTCTCCAGCA
CGAAGGGCTGAGCTCAGATGAGGAATTTGACAGCGTCTACGATCCTTCCTCCATCGCATC
ACTGCTTACAGAGAGCAACCTGCAGACCAGTTCTTGTTAGCTCATGGTCCACAAGGCCCA
GAAACCACACTTGAGGCCTGTCCTGGCCAGTCCAGCTCTGCTCTGCTCTGCCCTGCCCAG
CCTCAGATCCCCGTTGCTGTGGGAGACCCAATTATTCAGACCTATGACAGGGAGGGGTCT
GGGTGATGGTGA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GACCGGATGAATCGCGGCCGGGACCAGGTGGACCAGCTGAGGACAGAGCTCATGCAGGAG
AGGTCTGCTCGGCAGGACCTGGAGTGTGACAAAATCTCCTTGGAGAGACAGAACAAGGAC
TTGAAGAGCCGGTTGGCCAGCTCAGAAGGCTTCCAAAAGCCCAGCGCCAGCCTTTCTCAG
CTCGAGTCCCTGAATCGGGAGTTGCAGGAGCGGCTCCAGGCTGAAGAGAGGGAGAAGACA
GTTCTGCAGTCCACCAACCGAAAATTGGAGCGGAGAGTTAAAGAGCTGTCCATCCAGATT
GATGATGAGCGGCAACACGTCAATGACCAGAAAGACCAGCCTGAGGGTGAAGGCTTTGAA
GCGGCAGGTGGATGAAGCAGAAGAGGAAATTGAGCGCCTGGATGGCCTGAGGAAGAAGGC
CCAGCGTGAGCTGGAGGAACAACATGAGGTCAATGAACAGCTCCAGGCCCGGATCAAAGC
CCTGGAGAAGGACTCCTGGCGCAAAGCGTCTCGCTCAGCTGCTGAGTCAACTCTCCAGCA
CGAAGGGCTGAGCTCAGATGAGGAATTTGACAGCGTCTACGATCCTTCCTCCATCGCATC
ACTGCTTACAGAGAGCAACCTGCAGACCAGTTCTTGTTAGCTCATGGTCCACAAGGCCCA
GAAACCACACTTGAGGCCTGTCCTGGCCAGTCCAGCTCTGCTCTGCTCTGCCCTGCCCAG
CCTCAGATCCCCGTTGCTGTGGGAGACCCAATTATTCAGACCTATGACAGGGAGGGGTCT
GGGTGATGGTGA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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338-499, gnl|bosTau2|chr3 (11562255-11562094) |
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338-499, gnl|canFam2|chr17 (63654842-63655020) |
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338-499, gnl|danRer3|chr16 (26008547-26008378) |
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338-499, gnl|dasNov1|scaffold_70296 (318-496) |
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338-499, gnl|echTel1|scaffold_320593 (46215-46037) |
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338-499, gnl|fr1|chrUn (199566285-199566116) |
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338-499, gnl|galGal2|chrUn (97095079-97095256) |
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338-499, gnl|hg17|chr1 (148322268-148322446) |
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338-499, gnl|Hg17|chr1 (148322282-148322443) |
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338-499, gnl|loxAfr1|scaffold_824 (18034-17856) |
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338-499, gnl|mm7|chr3 (94536447-94536269) |
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338-499, gnl|Mm7|chr3 (94635883-94635722) |
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338-499, gnl|monDom2|scaffold_44 (4816291-4816466) |
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338-499, gnl|oryCun1|scaffold_208612 (7226-7048) |
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338-499, gnl|panTro1|chr1 (130074036-130074214) |
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338-499, gnl|rheMac2|chr1 (129974786-129974964) |
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338-499, gnl|rn3|chr2 (189599085-189598907) |
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338-499, gnl|tetNig1|chr8 (7721038-7720862) |
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338-499, gnl|xenTro1|scaffold_918 (152323-152499) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
338-499, gnl|bosTau2|chr3 (11562255-11562094) |
|
338-499, gnl|canFam2|chr17 (63654842-63655020) |
|
338-499, gnl|danRer3|chr16 (26008547-26008378) |
|
338-499, gnl|dasNov1|scaffold_70296 (318-496) |
|
338-499, gnl|echTel1|scaffold_320593 (46215-46037) |
|
338-499, gnl|fr1|chrUn (199566285-199566116) |
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338-499, gnl|galGal2|chrUn (97095079-97095256) |
|
338-499, gnl|hg17|chr1 (148322268-148322446) |
|
338-499, gnl|Hg17|chr1 (148322282-148322443) |
|
338-499, gnl|loxAfr1|scaffold_824 (18034-17856) |
|
338-499, gnl|mm7|chr3 (94536447-94536269) |
|
338-499, gnl|Mm7|chr3 (94635883-94635722) |
|
338-499, gnl|monDom2|scaffold_44 (4816291-4816466) |
|
338-499, gnl|oryCun1|scaffold_208612 (7226-7048) |
|
338-499, gnl|panTro1|chr1 (130074036-130074214) |
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338-499, gnl|rheMac2|chr1 (129974786-129974964) |
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338-499, gnl|rn3|chr2 (189599085-189598907) |
|
338-499, gnl|tetNig1|chr8 (7721038-7720862) |
|
338-499, gnl|xenTro1|scaffold_918 (152323-152499) |
