Non-Coding RNA Search

Ss1.1-Pig2-63I09.5

Sequence:


               
               TTTAGTTCAGCTATGCTATTTTAGTTCAATTCTTTTGATTTATGGACAATTCAATATGTC
AATTTAATATTCCTTCAGAAAGCACAGAATCATACCATGTGAGAATTGAAAGGAACCAAG
AGATTGTCTTTCTAATCTCTTAATCTTAGTTTTAAAGATGAAACTAAAGAACAGAGAAGT
TCAATAACTTGTCTGAGGTTATAGCTGGTTAATAGAAAATAAACTTGGGGAACTTAAAAG
TTATTGTAGTTCTAAATTTTATTATGCACTTTCTGTTAATCTCTATGTTTAGTAAACCAG
TAAGAAGGTCTGTATGTTTTTCATTGTCTTTGAAAGAGAGAAAAAAAAAAACTTCTAAGA
AAGCTAGAACCCTACCACTCAGGGTAGAGTCACTTGTAGAAAACAACTGATTTGTTCAGA
ACCCTGAGTGAATTTTCTCCAAGGAATGTGTTTGATTAACATGGTTTTTAAAATGGTAAT
GTAGTGGAAATGAGCATTTTGAAAGAATGACTGCATCTTGGTGTCCATTTATTTAATAGG
AATTATAGCATTGCTGAGATATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAGTTCAGCTATGCTATTTTAGTTCAATTCTTTTGATTTATGGACAATTCAATATGTC
AATTTAATATTCCTTCAGAAAGCACAGAATCATACCATGTGAGAATTGAAAGGAACCAAG
AGATTGTCTTTCTAATCTCTTAATCTTAGTTTTAAAGATGAAACTAAAGAACAGAGAAGT
TCAATAACTTGTCTGAGGTTATAGCTGGTTAATAGAAAATAAACTTGGGGAACTTAAAAG
TTATTGTAGTTCTAAATTTTATTATGCACTTTCTGTTAATCTCTATGTTTAGTAAACCAG
TAAGAAGGTCTGTATGTTTTTCATTGTCTTTGAAAGAGAGAAAAAAAAAAACTTCTAAGA
AAGCTAGAACCCTACCACTCAGGGTAGAGTCACTTGTAGAAAACAACTGATTTGTTCAGA
ACCCTGAGTGAATTTTCTCCAAGGAATGTGTTTGATTAACATGGTTTTTAAAATGGTAAT
GTAGTGGAAATGAGCATTTTGAAAGAATGACTGCATCTTGGTGTCCATTTATTTAATAGG
AATTATAGCATTGCTGAGATATAT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-213, gnl|bosTau2|chr11 (21651626-21651420)
               

               
               1-213, gnl|Hg17|chr3 (102969593-102969800)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-213, gnl|bosTau2|chr11 (21651626-21651420)
               

               
               1-213, gnl|Hg17|chr3 (102969593-102969800)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nco (0.161734)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)

	1-213, gnl\|bosTau2\|chr11 (21651626-21651420)
	1-213, gnl\|Hg17\|chr3 (102969593-102969800)