Non-Coding RNA Search

Ss1.1-Pig2-63N21.5

Sequence:


               
               TGATTTTTTTTTTTTTTTTTTTAAATACTCGTCTTTGAGAGAGGAAAAAAAAAAAAAAAA
GGCCTAGGTGTTTCTGGAATGTTTCTAAGAGCTGGAGTAGTTGGGCCGGGGTGGCACCTT
CGAGGTTCAGGGTATCCCGAAGGAATAACTGAAATGGAGGCTTAATGTATTTAATATTAC
ATGTATTTTAATTTGGTTTTAAACTGATACTGCATTGTTTGAAAGAAATTGAAATAGTAT
CAGAGATGTGTTCACAGCAATATTTATTGCCTTCCTGAGAGGTTTTAAAGTTCTAACTTA
TGATTCTTTAAAGTAACTAACACTAAATATAACCCCAAATCCAATATGATAGAAAAAAGT
GATTTTTGATGTTATTTTTCTCTTGTTCTTAAATAAATCTAGCGTATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGATTTTTTTTTTTTTTTTTTTAAATACTCGTCTTTGAGAGAGGAAAAAAAAAAAAAAAA
GGCCTAGGTGTTTCTGGAATGTTTCTAAGAGCTGGAGTAGTTGGGCCGGGGTGGCACCTT
CGAGGTTCAGGGTATCCCGAAGGAATAACTGAAATGGAGGCTTAATGTATTTAATATTAC
ATGTATTTTAATTTGGTTTTAAACTGATACTGCATTGTTTGAAAGAAATTGAAATAGTAT
CAGAGATGTGTTCACAGCAATATTTATTGCCTTCCTGAGAGGTTTTAAAGTTCTAACTTA
TGATTCTTTAAAGTAACTAACACTAAATATAACCCCAAATCCAATATGATAGAAAAAAGT
GATTTTTGATGTTATTTTTCTCTTGTTCTTAAATAAATCTAGCGTATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               173-393, gnl|bosTau2|chr14 (12087440-12087680)
               

               
               173-393, gnl|Hg17|chr8 (61104412-61104653)
               

               
               173-393, gnl|Mm7|chr4 (7902807-7903048)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               173-393, gnl|bosTau2|chr14 (12087440-12087680)
               

               
               173-393, gnl|Hg17|chr8 (61104412-61104653)
               

               
               173-393, gnl|Mm7|chr4 (7902807-7903048)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pty (0.142714)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pty (0.142714)

	173-393, gnl\|bosTau2\|chr14 (12087440-12087680)
	173-393, gnl\|Hg17\|chr8 (61104412-61104653)
	173-393, gnl\|Mm7\|chr4 (7902807-7903048)