Non-Coding RNA Search

Ss1.1-Pig2-65M16.5

Sequence:


               
               AAGGAACCCAAACTGGGCCATTTCAGAGCAGCATGATTCTGAGAACACATGGGTAAGAGC
TTCCTTCTCTGCTTAGAGATCATGTGCTGGGTGAATAATTTGCTTCAAGGATTGAGAATC
AGACACACAGGAAATAGTTACTAGGGCAGATGCCTTCCACGATACTTTATGCTCTTGTGC
TTTATTTCTGAAGCAGAGTGGAACGCTAAAGATGTGTCCTTGTGACAGCATAAACCCTGG
AGGTGACAATCTGTATTATTGCTCTTTGCTTCTCTTTTCTGCTTCTGTTGTGAGCCAGTT
TTCTTCTTACGCTGCACCACAGAGAATACTTCAAATTTCTGATATCTGCCGTGGGGTCCA
AACAAAGGGAATAAAACCATAATTCCATCTTTTGGAGAATGGAAAACTCTGTGAAATGGT
TTTCCATACAAAGATAATTTATAAAAGAAAAGGGCTACTGCTTATCTTTCCAGAGAAATG
GAAAATCAATCCTAATGGCCCATAAGCCAATTGGACTTTTTTTTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGGAACCCAAACTGGGCCATTTCAGAGCAGCATGATTCTGAGAACACATGGGTAAGAGC
TTCCTTCTCTGCTTAGAGATCATGTGCTGGGTGAATAATTTGCTTCAAGGATTGAGAATC
AGACACACAGGAAATAGTTACTAGGGCAGATGCCTTCCACGATACTTTATGCTCTTGTGC
TTTATTTCTGAAGCAGAGTGGAACGCTAAAGATGTGTCCTTGTGACAGCATAAACCCTGG
AGGTGACAATCTGTATTATTGCTCTTTGCTTCTCTTTTCTGCTTCTGTTGTGAGCCAGTT
TTCTTCTTACGCTGCACCACAGAGAATACTTCAAATTTCTGATATCTGCCGTGGGGTCCA
AACAAAGGGAATAAAACCATAATTCCATCTTTTGGAGAATGGAAAACTCTGTGAAATGGT
TTTCCATACAAAGATAATTTATAAAAGAAAAGGGCTACTGCTTATCTTTCCAGAGAAATG
GAAAATCAATCCTAATGGCCCATAAGCCAATTGGACTTTTTTTTTTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-527, gnl|bosTau2|chr2 (47472566-47473085)
               

               
               1-527, gnl|Hg17|chr2 (216070687-216069835)
               

               
               1-527, gnl|Mm7|chr1 (71845103-71844598)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-527, gnl|bosTau2|chr2 (47472566-47473085)
               

               
               1-527, gnl|Hg17|chr2 (216070687-216069835)
               

               
               1-527, gnl|Mm7|chr1 (71845103-71844598)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               amn (0.417711)
               

               
               liv (0.146284)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               amn (0.417711)
               

               
               liv (0.146284)

	1-527, gnl\|bosTau2\|chr2 (47472566-47473085)
	1-527, gnl\|Hg17\|chr2 (216070687-216069835)
	1-527, gnl\|Mm7\|chr1 (71845103-71844598)