Non-Coding RNA Search

Ss1.1-Pig2-66I04.5

Sequence:


               
               GCCTGGCAACGGCGGTGGCGCCCGGACTGGGAGAGTTTCCAGTATGGCTTCTGCCCCGAC
TTCTAAATATAATTCACACTCGTTGGAGAATGAATCTATTAAGAGGACTTCTAGGGACGG
AGTTAATCGGGATATGGGTGAGGCTGTCCCTCGACTTCCGGGAGAAACCCCCATTACTGA
CAAAGAAGTTATTTACATGTCCTTTCAATGGCCCCATTAAGGGAAGAGTTTACATCACAA
ATTATCGTCTTTATTTAAGAAGTTTGGAAACGGATTCGGCTCTAATACTTGATGTTCCCC
TGGGTGTGATCTCAAGAATTGAAAAAATGGGAGGCGCGACAAGTAGAGGAGAAAATTCCT
ATGGGCTAGATATTACTTGTAAAGACATGCGGAACCTGAGATTCGCCCTGAAGCAGGAAG
GCCACAGCAGAAGAGATATGTTTGAGATCCTCACGAGATACGCCTTCCCCCTGGCCCACA
GTCTGCCAATGTTTGCATTTTTAAATGAAGAGAAGTTTAATGTGGACGGATGGACAGTTT
ATAACCCAGTTGAAGAATACAGAAGGCAGGGCTTGCCCAACCACCACTGGAGGATCACCT
TTATTAACAAGTGCTACGAGCTCTGTGACACCTACCCCGCTCTCCTGGTGGTGCCGTACC
GCGCCGCAGATGAAGATCTCAGGAGAGTTGCGACGTTCCGGTCCCGGAATCGAATCCCAG
TGCTGTCGTGGATTCACCCAGAAAACAAGACGGTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCTGGCAACGGCGGTGGCGCCCGGACTGGGAGAGTTTCCAGTATGGCTTCTGCCCCGAC
TTCTAAATATAATTCACACTCGTTGGAGAATGAATCTATTAAGAGGACTTCTAGGGACGG
AGTTAATCGGGATATGGGTGAGGCTGTCCCTCGACTTCCGGGAGAAACCCCCATTACTGA
CAAAGAAGTTATTTACATGTCCTTTCAATGGCCCCATTAAGGGAAGAGTTTACATCACAA
ATTATCGTCTTTATTTAAGAAGTTTGGAAACGGATTCGGCTCTAATACTTGATGTTCCCC
TGGGTGTGATCTCAAGAATTGAAAAAATGGGAGGCGCGACAAGTAGAGGAGAAAATTCCT
ATGGGCTAGATATTACTTGTAAAGACATGCGGAACCTGAGATTCGCCCTGAAGCAGGAAG
GCCACAGCAGAAGAGATATGTTTGAGATCCTCACGAGATACGCCTTCCCCCTGGCCCACA
GTCTGCCAATGTTTGCATTTTTAAATGAAGAGAAGTTTAATGTGGACGGATGGACAGTTT
ATAACCCAGTTGAAGAATACAGAAGGCAGGGCTTGCCCAACCACCACTGGAGGATCACCT
TTATTAACAAGTGCTACGAGCTCTGTGACACCTACCCCGCTCTCCTGGTGGTGCCGTACC
GCGCCGCAGATGAAGATCTCAGGAGAGTTGCGACGTTCCGGTCCCGGAATCGAATCCCAG
TGCTGTCGTGGATTCACCCAGAAAACAAGACGGTCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|26327617|dbj|BAC27552.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|26327617|dbj|BAC27552.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               566-722, gnl|bosTau2|chrX (11300581-11300737)
               

               
               566-722, gnl|Hg17|chrX (149480306-149480462)
               

               
               566-722, gnl|Mm7|chrX (66681633-66681789)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               566-722, gnl|bosTau2|chrX (11300581-11300737)
               

               
               566-722, gnl|Hg17|chrX (149480306-149480462)
               

               
               566-722, gnl|Mm7|chrX (66681633-66681789)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nep (0.183925)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	566-722, gnl\|bosTau2\|chrX (11300581-11300737)
	566-722, gnl\|Hg17\|chrX (149480306-149480462)
	566-722, gnl\|Mm7\|chrX (66681633-66681789)