Non-Coding RNA Search

Ss1.1-Pig2-66K04.5

Sequence:


               
               GACCTGCTTCAAGCTGGCCCCTCCATTGGACTGTGCTGAGGGCAAAGGCTGTCCCAGAGA
CCCCAGGGCCTTCAAGGTGTCGGCTCGGCACTTGCTGCGACTTCAGCAGAGGCGACTCCA
GCTCCAGGGCACAGGCACGGACAATGGGCAGGTTTGGCCTTCCGAGGACCAAGGGGCCCC
CATATCATTCTACAACCGGTGCCTGCAGCTGACCTAGGGAGCCAGAGGACCCAAAGGGCA
CAAATCCTGGGACCAGTGACCTCAGTTCCAGCTTTCCTGGACACAGACTGGACTGTGACC
CTGGCTTTGCCAGGCCCTGGGGGCTCAGCCTCCCCTCCATATCTTAGATTGAGGCATGAC
ATGGGTTTTTGTGGACAAACAGAAGGCTGCGTGGTAGGGCTGGGGACCAAGACCCAAATG
CTGGACCATGTCTCTTGCTGTGCTTGGTGATCTTGGGCTGGTGACACAACCCCTCTGACT
TGGATGTGGTGTTCAGAAGGCTCATTCTCCTGCCTTGGGCTTGGACCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACCTGCTTCAAGCTGGCCCCTCCATTGGACTGTGCTGAGGGCAAAGGCTGTCCCAGAGA
CCCCAGGGCCTTCAAGGTGTCGGCTCGGCACTTGCTGCGACTTCAGCAGAGGCGACTCCA
GCTCCAGGGCACAGGCACGGACAATGGGCAGGTTTGGCCTTCCGAGGACCAAGGGGCCCC
CATATCATTCTACAACCGGTGCCTGCAGCTGACCTAGGGAGCCAGAGGACCCAAAGGGCA
CAAATCCTGGGACCAGTGACCTCAGTTCCAGCTTTCCTGGACACAGACTGGACTGTGACC
CTGGCTTTGCCAGGCCCTGGGGGCTCAGCCTCCCCTCCATATCTTAGATTGAGGCATGAC
ATGGGTTTTTGTGGACAAACAGAAGGCTGCGTGGTAGGGCTGGGGACCAAGACCCAAATG
CTGGACCATGTCTCTTGCTGTGCTTGGTGATCTTGGGCTGGTGACACAACCCCTCTGACT
TGGATGTGGTGTTCAGAAGGCTCATTCTCCTGCCTTGGGCTTGGACCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               48-528, gnl|bosTau2|chr17 (44249048-44249540)
               

               
               48-528, gnl|Hg17|chr22 (29856477-29855993)
               

               
               48-528, gnl|Mm7|chr11 (3444972-3445441)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               48-528, gnl|bosTau2|chr17 (44249048-44249540)
               

               
               48-528, gnl|Hg17|chr22 (29856477-29855993)
               

               
               48-528, gnl|Mm7|chr11 (3444972-3445441)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fcc (0.197785)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)

	48-528, gnl\|bosTau2\|chr17 (44249048-44249540)
	48-528, gnl\|Hg17\|chr22 (29856477-29855993)
	48-528, gnl\|Mm7\|chr11 (3444972-3445441)