Ss1.1-Pig2-66P22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCCGCAGGTCACGGCCCCGCGAGGCGACCGCCGCCCCGCGCCCCGCCGCCCCGGAGCAG GGGTCCAGGCATGGACGGGAAGAGATGCAGCGTGTGGATGTTTTTACCTCTTGTTTTTAC CCTGTTTACTTCAGCTGGATTGTGGATAGTATACTTCATAGCTGTGGAAGATGACAAAAT TTTCCCATTAAATTCAGCTGAAAGGAAACTGGGTGTGAAGCATGCGCCATACATAAGTAT TGCAGGTGATGAGCCTCCTGCAAGCTGCGTGTTTAGTCAAGTTATGAACATGGCAGCCTT CCTAGCTCTTGTGGTAGCTGTTCTGCGCTTCATACAGCTGAAACCAAAGGTTTTAAATCC GTGGCTGAATATTAGTGGCTTGGTGGCGCTCTGTCTGGCTTCCTTTGGAATGACCTTACT TGGTAATTTTCAGCTCACAAATGATGAAGAAATCCATAATGTCGGAACCTCCTTGACTTT CGGGTTTGGCACATTGACCTGCTGGATCCAGGCTGCCTTGACACTCAAAGTCAACATCAA GAATGAAGGACGGAAAACTGGAATTCCACGAGTTATTCTCTCAGCATCTATCACTCTCTG TGTGGTCCTCTACTTCATCCTGATGGCCCAAGGCATCCACATGTACGCAGCCAGGGTCCA GTGGGGCCTGGTCATGTGCTTCCTGTCTTACTTCGGCACCTTCGCCGTGGAGTTCCGGCA CTATCGTTACGAGATCGTGTGTTCCGAGTACCAGGAGAATTTCCTGAGCTTCTCGGAGAC CCTGTCGGAAGCGTCTGAATACCAGACCGACCAGGTGTAACCCATCAGGTTTTGCCCGCT GGGGAGGTGGGTGTGGCAGCGGGGGAGGGGCTGGGACACACCCACAGGACTTTACACATC CCCTCATGACACACTGCACACGTCCCACACACACACACACACACACACGCGAGCGCGTGT GTGGCCACATTTGCCAAATGAGCTTTTCAGGGCGAGTTATTTACTGAAAAAGCACAAGCC CTGTGTCGAAATACACGCTGTTACACTGAAAATACGATGCACGACAGAGCAAGAAGCTTG TGCATGATCACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCCGCAGGTCACGGCCCCGCGAGGCGACCGCCGCCCCGCGCCCCGCCGCCCCGGAGCAG GGGTCCAGGCATGGACGGGAAGAGATGCAGCGTGTGGATGTTTTTACCTCTTGTTTTTAC CCTGTTTACTTCAGCTGGATTGTGGATAGTATACTTCATAGCTGTGGAAGATGACAAAAT TTTCCCATTAAATTCAGCTGAAAGGAAACTGGGTGTGAAGCATGCGCCATACATAAGTAT TGCAGGTGATGAGCCTCCTGCAAGCTGCGTGTTTAGTCAAGTTATGAACATGGCAGCCTT CCTAGCTCTTGTGGTAGCTGTTCTGCGCTTCATACAGCTGAAACCAAAGGTTTTAAATCC GTGGCTGAATATTAGTGGCTTGGTGGCGCTCTGTCTGGCTTCCTTTGGAATGACCTTACT TGGTAATTTTCAGCTCACAAATGATGAAGAAATCCATAATGTCGGAACCTCCTTGACTTT CGGGTTTGGCACATTGACCTGCTGGATCCAGGCTGCCTTGACACTCAAAGTCAACATCAA GAATGAAGGACGGAAAACTGGAATTCCACGAGTTATTCTCTCAGCATCTATCACTCTCTG TGTGGTCCTCTACTTCATCCTGATGGCCCAAGGCATCCACATGTACGCAGCCAGGGTCCA GTGGGGCCTGGTCATGTGCTTCCTGTCTTACTTCGGCACCTTCGCCGTGGAGTTCCGGCA CTATCGTTACGAGATCGTGTGTTCCGAGTACCAGGAGAATTTCCTGAGCTTCTCGGAGAC CCTGTCGGAAGCGTCTGAATACCAGACCGACCAGGTGTAACCCATCAGGTTTTGCCCGCT GGGGAGGTGGGTGTGGCAGCGGGGGAGGGGCTGGGACACACCCACAGGACTTTACACATC CCCTCATGACACACTGCACACGTCCCACACACACACACACACACACACGCGAGCGCGTGT GTGGCCACATTTGCCAAATGAGCTTTTCAGGGCGAGTTATTTACTGAAAAAGCACAAGCC CTGTGTCGAAATACACGCTGTTACACTGAAAATACGATGCACGACAGAGCAAGAAGCTTG TGCATGATCACC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 432-611, gnl|bosTau2|chr6 (54397433-54397612) | |
| 432-611, gnl|canFam2|chr32 (9432998-9433214) | |
| 432-611, gnl|danRer3|chrNA (31792011-31792210) | |
| 432-611, gnl|dasNov1|scaffold_4822 (58419-58204) | |
| 432-611, gnl|echTel1|scaffold_288632 (42061-41846) | |
| 432-611, gnl|fr1|chrUn (35959829-35960010) | |
| 432-611, gnl|galGal2|chr4 (46980398-46980187) | |
| 432-611, gnl|hg17|chr4 (83768373-83768589) | |
| 432-611, gnl|Hg17|chr4 (83768572-83768393) | |
| 432-611, gnl|loxAfr1|scaffold_188030 (327-111) | |
| 432-611, gnl|mm7|chr5 (99298343-99298543) | |
| 432-611, gnl|Mm7|chr5 (99298534-99298355) | |
| 432-611, gnl|monDom2|scaffold_132 (2234775-2234991) | |
| 432-611, gnl|oryCun1|scaffold_91310 (14062-13846) | |
| 432-611, gnl|panTro1|chr3 (49945253-49945037) | |
| 432-611, gnl|rheMac2|chr5 (47101155-47100939) | |
| 432-611, gnl|rn3|chr14 (10822113-10821913) | |
| 432-611, gnl|xenTro1|scaffold_867 (501576-501791) | |
| 612-921, gnl|bosTau2|chr6 (54401158-54401467) | |
| 612-921, gnl|Hg17|chr4 (83764051-83763734) | |
| 612-921, gnl|Mm7|chr5 (99294842-99294524) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 432-611, gnl|bosTau2|chr6 (54397433-54397612) | |
| 432-611, gnl|canFam2|chr32 (9432998-9433214) | |
| 432-611, gnl|danRer3|chrNA (31792011-31792210) | |
| 432-611, gnl|dasNov1|scaffold_4822 (58419-58204) | |
| 432-611, gnl|echTel1|scaffold_288632 (42061-41846) | |
| 432-611, gnl|fr1|chrUn (35959829-35960010) | |
| 432-611, gnl|galGal2|chr4 (46980398-46980187) | |
| 432-611, gnl|hg17|chr4 (83768373-83768589) | |
| 432-611, gnl|Hg17|chr4 (83768572-83768393) | |
| 432-611, gnl|loxAfr1|scaffold_188030 (327-111) | |
| 432-611, gnl|mm7|chr5 (99298343-99298543) | |
| 432-611, gnl|Mm7|chr5 (99298534-99298355) | |
| 432-611, gnl|monDom2|scaffold_132 (2234775-2234991) | |
| 432-611, gnl|oryCun1|scaffold_91310 (14062-13846) | |
| 432-611, gnl|panTro1|chr3 (49945253-49945037) | |
| 432-611, gnl|rheMac2|chr5 (47101155-47100939) | |
| 432-611, gnl|rn3|chr14 (10822113-10821913) | |
| 432-611, gnl|xenTro1|scaffold_867 (501576-501791) | |
| 612-921, gnl|bosTau2|chr6 (54401158-54401467) | |
| 612-921, gnl|Hg17|chr4 (83764051-83763734) | |
| 612-921, gnl|Mm7|chr5 (99294842-99294524) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |