Ss1.1-Pig2-67J16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GACGAGAAAAGGTCAAACAAGGCCCAGACAAAGGCCTGGTGAAGGAGGTGCTGAAGCGGA GAATTGAGATGGAGAGGATCTTGTCCGTGTCCCTCAGTACCATGCAGGATGACATTTTTA TTCTTCATGAGCAAGAGTATGACAGTTTGCTTGAATCCGTCTTCAAAACTGAGTTCTTGA GCCTCTTAGCAAAGCGTTATGAGGAAAAAACCCAGAAGCAACTACCTCTGAAATTTAGCA ACACGCTTGAACTCAAGTTGAAAAAGGAGAACTGGGGTCCCTGGAGCGCTGGGGGCTCCC GGCAAGTGCAGTTCCACCAGGGCTTTGGCGACCTGGCCATCCTCAAACCCAGCAACAAAG TGCTGCAGGTCAGCATCGGACCCGGGCTGCCCAAGAACTCCCGTCCTACCCGAAGGAACA CCATTCAAAACAGAGGTTATTCCAGCAGGACGCACAATGCCAACTACCCCATGAGAGCGG CCCCTCCACCCCCAGGGTACCATCAGAATGGAGTCCTCAAAAACCAGTTTGTGCCACATC CCCACACTCCTGGAAACCATAGGTCAAATCAGAAGAGCCTGTACACTTCCATGGCCCGTC CACCCTTGCCACGACAGCAGTCCACTGGCTCAGACCGAGTGACACAGACGCCGGAGAGCT TGGATTTCCTCAAGGTCCCTGACCAGGGCGCCGCATGGGTCCGGAGACAAACAACCAGCC GGCCCCCCCCAGCAGGGGGCAGACCCAAACCCCAGCCCAAGCCCAAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GACGAGAAAAGGTCAAACAAGGCCCAGACAAAGGCCTGGTGAAGGAGGTGCTGAAGCGGA GAATTGAGATGGAGAGGATCTTGTCCGTGTCCCTCAGTACCATGCAGGATGACATTTTTA TTCTTCATGAGCAAGAGTATGACAGTTTGCTTGAATCCGTCTTCAAAACTGAGTTCTTGA GCCTCTTAGCAAAGCGTTATGAGGAAAAAACCCAGAAGCAACTACCTCTGAAATTTAGCA ACACGCTTGAACTCAAGTTGAAAAAGGAGAACTGGGGTCCCTGGAGCGCTGGGGGCTCCC GGCAAGTGCAGTTCCACCAGGGCTTTGGCGACCTGGCCATCCTCAAACCCAGCAACAAAG TGCTGCAGGTCAGCATCGGACCCGGGCTGCCCAAGAACTCCCGTCCTACCCGAAGGAACA CCATTCAAAACAGAGGTTATTCCAGCAGGACGCACAATGCCAACTACCCCATGAGAGCGG CCCCTCCACCCCCAGGGTACCATCAGAATGGAGTCCTCAAAAACCAGTTTGTGCCACATC CCCACACTCCTGGAAACCATAGGTCAAATCAGAAGAGCCTGTACACTTCCATGGCCCGTC CACCCTTGCCACGACAGCAGTCCACTGGCTCAGACCGAGTGACACAGACGCCGGAGAGCT TGGATTTCCTCAAGGTCCCTGACCAGGGCGCCGCATGGGTCCGGAGACAAACAACCAGCC GGCCCCCCCCAGCAGGGGGCAGACCCAAACCCCAGCCCAAGCCCAAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 241-404, gnl|bosTau2|chr10 (37942065-37941902) | |
| 241-404, gnl|canFam2|chr30 (27084551-27084751) | |
| 241-404, gnl|danRer3|chr7 (21361666-21361835) | |
| 241-404, gnl|dasNov1|scaffold_90514 (284-492) | |
| 241-404, gnl|echTel1|scaffold_177107 (1104-892) | |
| 241-404, gnl|fr1|chrUn (81372908-81372710) | |
| 241-404, gnl|galGal2|chr10 (7582246-7582069) | |
| 241-404, gnl|hg17|chr15 (57240556-57240758) | |
| 241-404, gnl|Hg17|chr15 (57240725-57240562) | |
| 241-404, gnl|loxAfr1|scaffold_176879 (1494-1349) | |
| 241-404, gnl|mm7|chr9 (70410329-70410125) | |
| 241-404, gnl|Mm7|chr9 (70410158-70410320) | |
| 241-404, gnl|monDom2|scaffold_12 (37513244-37513461) | |
| 241-404, gnl|oryCun1|scaffold_199043 (23917-24119) | |
| 241-404, gnl|panTro1|chr16 (57657236-57657438) | |
| 241-404, gnl|rheMac2|chr7 (37532030-37532232) | |
| 241-404, gnl|rn3|chr8 (74874647-74874441) | |
| 241-404, gnl|tetNig1|chr5 (5538314-5538481) | |
| 241-404, gnl|xenTro1|scaffold_297 (684871-684703) | |
| 494-694, gnl|bosTau2|chr10 (37936885-37936685) | |
| 494-694, gnl|Hg17|chr15 (57233284-57233084) | |
| 494-694, gnl|Mm7|chr9 (70415752-70415952) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 241-404, gnl|bosTau2|chr10 (37942065-37941902) | |
| 241-404, gnl|canFam2|chr30 (27084551-27084751) | |
| 241-404, gnl|danRer3|chr7 (21361666-21361835) | |
| 241-404, gnl|dasNov1|scaffold_90514 (284-492) | |
| 241-404, gnl|echTel1|scaffold_177107 (1104-892) | |
| 241-404, gnl|fr1|chrUn (81372908-81372710) | |
| 241-404, gnl|galGal2|chr10 (7582246-7582069) | |
| 241-404, gnl|hg17|chr15 (57240556-57240758) | |
| 241-404, gnl|Hg17|chr15 (57240725-57240562) | |
| 241-404, gnl|loxAfr1|scaffold_176879 (1494-1349) | |
| 241-404, gnl|mm7|chr9 (70410329-70410125) | |
| 241-404, gnl|Mm7|chr9 (70410158-70410320) | |
| 241-404, gnl|monDom2|scaffold_12 (37513244-37513461) | |
| 241-404, gnl|oryCun1|scaffold_199043 (23917-24119) | |
| 241-404, gnl|panTro1|chr16 (57657236-57657438) | |
| 241-404, gnl|rheMac2|chr7 (37532030-37532232) | |
| 241-404, gnl|rn3|chr8 (74874647-74874441) | |
| 241-404, gnl|tetNig1|chr5 (5538314-5538481) | |
| 241-404, gnl|xenTro1|scaffold_297 (684871-684703) | |
| 494-694, gnl|bosTau2|chr10 (37936885-37936685) | |
| 494-694, gnl|Hg17|chr15 (57233284-57233084) | |
| 494-694, gnl|Mm7|chr9 (70415752-70415952) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) |