Non-Coding RNA Search

Ss1.1-Pig2-67N05.5

Sequence:


               
               AGAAGGAGAACGTGCTTCTGATCTTGCTCTGGAACTCATCGACCGCCACGAGCCTTCAGA
TAGTGGCAAACTGCGGCACGTGCTGAGCCTGGACGGCTTCCTCAGCTACCTCTGCTCGAA
GGACGGAGACATCTTCAATCCGACCTGCCTCCCCATCTACCAGGATATGACTCAACCCCT
GAACCACTACTTCATCAACTCCTCCCACAACACCTACCTAGTGGGGGACCAGCTTTGTGG
CCAGAGCAGCGTGGAGGGTTACATACGGGCCCTGAAACGGGGGTGCCGCTGCGTGGAGGT
GGATATATGGGATGGACCTAACGGGGAACCTGTTGTTTATCACGGACACACCCTGACCTC
TCGCATCCCGTTCAAAGATGTTGTGGCCGCTATAGCACAGTATGCCTTCCAGACATCAGA
CTATCCAGTCATCTTGTCCCTGGAGAACCACTGCAGCTGGGAGCAGCAGGAGATGATAGC
ACACCACCTGACTGAGATCCTGGGGGAGCAGCTCCTGAGCACCACCTTGGACGGGCAGCT
TCCCACTCAGCTGCCCTCCCCCGAGGAGCTTCGGAGGAAGATCTTGGTGAAGGGGAAGAA
GTTAAGAACACTTGAGGAGGATCTTGAGGAAGAGGAGGAAGAGCCAGAAGAGTCTGAACT
GGAGGGGGAGCAGGAGGCTGAGCTGGAGCTGGAGGCCCAGTTTGAATCTGAGCCCCAGGA
GCTGAGCCCTCGCAGTAAAGACAAAAAGGAGAAGGTTGTGAGGTGCCCGCTGTTGTGTTC
GCCTTTGTGTTGTGAGATTATGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAGGAGAACGTGCTTCTGATCTTGCTCTGGAACTCATCGACCGCCACGAGCCTTCAGA
TAGTGGCAAACTGCGGCACGTGCTGAGCCTGGACGGCTTCCTCAGCTACCTCTGCTCGAA
GGACGGAGACATCTTCAATCCGACCTGCCTCCCCATCTACCAGGATATGACTCAACCCCT
GAACCACTACTTCATCAACTCCTCCCACAACACCTACCTAGTGGGGGACCAGCTTTGTGG
CCAGAGCAGCGTGGAGGGTTACATACGGGCCCTGAAACGGGGGTGCCGCTGCGTGGAGGT
GGATATATGGGATGGACCTAACGGGGAACCTGTTGTTTATCACGGACACACCCTGACCTC
TCGCATCCCGTTCAAAGATGTTGTGGCCGCTATAGCACAGTATGCCTTCCAGACATCAGA
CTATCCAGTCATCTTGTCCCTGGAGAACCACTGCAGCTGGGAGCAGCAGGAGATGATAGC
ACACCACCTGACTGAGATCCTGGGGGAGCAGCTCCTGAGCACCACCTTGGACGGGCAGCT
TCCCACTCAGCTGCCCTCCCCCGAGGAGCTTCGGAGGAAGATCTTGGTGAAGGGGAAGAA
GTTAAGAACACTTGAGGAGGATCTTGAGGAAGAGGAGGAAGAGCCAGAAGAGTCTGAACT
GGAGGGGGAGCAGGAGGCTGAGCTGGAGCTGGAGGCCCAGTTTGAATCTGAGCCCCAGGA
GCTGAGCCCTCGCAGTAAAGACAAAAAGGAGAAGGTTGTGAGGTGCCCGCTGTTGTGTTC
GCCTTTGTGTTGTGAGATTATGAC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q8CAB1_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q8CAB1_MOUSE

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               65-268, gnl|bosTau2|chr2 (59497573-59497370)
               

               
               65-268, gnl|Hg17|chr2 (219318256-219318459)
               

               
               65-268, gnl|Mm7|chr1 (74794162-74794365)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               65-268, gnl|bosTau2|chr2 (59497573-59497370)
               

               
               65-268, gnl|Hg17|chr2 (219318256-219318459)
               

               
               65-268, gnl|Mm7|chr1 (74794162-74794365)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	65-268, gnl\|bosTau2\|chr2 (59497573-59497370)
	65-268, gnl\|Hg17\|chr2 (219318256-219318459)
	65-268, gnl\|Mm7\|chr1 (74794162-74794365)