Non-Coding RNA Search

Ss1.1-Pig2-68G15.5

Sequence:


               
               AGACATCAGAGGATCCACGGCGATAAACACGTTCAGAATCCTGACCTGTGGTGAGACCTG
TGAGAGTCGGGATAGGATGGAGCACCAGTGGCAAAACGTCGAGGCTCCCGTGTCTTTTAA
ATGTAATGCGTGTGAGAGAAGCTTCACTAGGAATAGAAGCCTTATTGAACACCAGAAAAT
CCACACTGGTGAGAAACCCTATCCATGTGATGCGTGTGGAAAAGGTTTCACTCGACCTTC
ATATCTTGTTCAGCATCAGAGAAGCCACGTTGGGAAAAAAATCCTATCACCATGACCCGT
GTCTTATGTGCTAGAGTTGGTGCTCATTCTTCATTGAACTGAAGCCACCCTGGAGCCCTT
GCTGATTACAACACTGTGGGCTGGGCTTTATTTACCACCACACGTCAGCAGCTCTTTGTT
GGAACATACAGAGTCAGGTTGAAATGAATTCTCTTCTGCGTCCTAGAAGGTGATTAAAAA
ACAAACAAACCCTTGTTTGATAGGAAGCAACAGGAGAGTTGGTCCGGAAGAGGTAGGACC
TGAAATGGTTCTCCCCTTTTGGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGACATCAGAGGATCCACGGCGATAAACACGTTCAGAATCCTGACCTGTGGTGAGACCTG
TGAGAGTCGGGATAGGATGGAGCACCAGTGGCAAAACGTCGAGGCTCCCGTGTCTTTTAA
ATGTAATGCGTGTGAGAGAAGCTTCACTAGGAATAGAAGCCTTATTGAACACCAGAAAAT
CCACACTGGTGAGAAACCCTATCCATGTGATGCGTGTGGAAAAGGTTTCACTCGACCTTC
ATATCTTGTTCAGCATCAGAGAAGCCACGTTGGGAAAAAAATCCTATCACCATGACCCGT
GTCTTATGTGCTAGAGTTGGTGCTCATTCTTCATTGAACTGAAGCCACCCTGGAGCCCTT
GCTGATTACAACACTGTGGGCTGGGCTTTATTTACCACCACACGTCAGCAGCTCTTTGTT
GGAACATACAGAGTCAGGTTGAAATGAATTCTCTTCTGCGTCCTAGAAGGTGATTAAAAA
ACAAACAAACCCTTGTTTGATAGGAAGCAACAGGAGAGTTGGTCCGGAAGAGGTAGGACC
TGAAATGGTTCTCCCCTTTTGGAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-564, gnl|bosTau2|chr23 (25723730-25723181)
               


               
               249-550, gnl|bosTau2|chr23 (25646056-25645760)
               

               
               249-550, gnl|Hg17|chr6 (28442019-28442284)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-564, gnl|bosTau2|chr23 (25723730-25723181)
               


               
               249-550, gnl|bosTau2|chr23 (25646056-25645760)
               

               
               249-550, gnl|Hg17|chr6 (28442019-28442284)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	1-564, gnl\|bosTau2\|chr23 (25723730-25723181)

	249-550, gnl\|bosTau2\|chr23 (25646056-25645760)
	249-550, gnl\|Hg17\|chr6 (28442019-28442284)