Ss1.1-Pig2-68O10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCTGCCTTGGCATTGGGGTCATCCTTCTGTTGTCTGCAAAGAGCATCAAAGAAATAGAGA TTAATTACACAGAAAAATGTGCAAATTGTGCAAAACTGCGGGAAAATGCTGCTAATTTTG CCAAAGAATGCGCCTGCTCTATTCCTTTTTACCTTTCAGAGGCAATGAGGGGTAATGTGT ATATGTACTATAAATTGGATGGCTTCTATCAGAACCTCTATCGGTATATTTTATCCAGAA GTAATAGCCAACTGGTGGGTACAGATATAAAGGATGTTACAAACTGTTCTCCATTCAAAA ATTCCCCAAATGGGACCCCCATCGCTCCTTGTGGTGCTATTGCCAACAGCATATTCAATG ACACCATTATTCTTTCATACAATCTTAATTCATCTATACATATTAAAGTCCCAATGCTAA GGAGTGGGATTACATGGTGGACAGACAAGTATGTGAAGTTTCAGAATCCAAGTTCCCACA ATCTTTCTAGTGCATTTGCAGGAACCACGAAGCCCCCGTACTGGCCTAAGCCTGCCTATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCTGCCTTGGCATTGGGGTCATCCTTCTGTTGTCTGCAAAGAGCATCAAAGAAATAGAGA TTAATTACACAGAAAAATGTGCAAATTGTGCAAAACTGCGGGAAAATGCTGCTAATTTTG CCAAAGAATGCGCCTGCTCTATTCCTTTTTACCTTTCAGAGGCAATGAGGGGTAATGTGT ATATGTACTATAAATTGGATGGCTTCTATCAGAACCTCTATCGGTATATTTTATCCAGAA GTAATAGCCAACTGGTGGGTACAGATATAAAGGATGTTACAAACTGTTCTCCATTCAAAA ATTCCCCAAATGGGACCCCCATCGCTCCTTGTGGTGCTATTGCCAACAGCATATTCAATG ACACCATTATTCTTTCATACAATCTTAATTCATCTATACATATTAAAGTCCCAATGCTAA GGAGTGGGATTACATGGTGGACAGACAAGTATGTGAAGTTTCAGAATCCAAGTTCCCACA ATCTTTCTAGTGCATTTGCAGGAACCACGAAGCCCCCGTACTGGCCTAAGCCTGCCTATG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 58-167, gnl|bosTau2|chr1 (23943002-23943111) | |
| 58-167, gnl|canFam2|chr33 (9796134-9796320) | |
| 58-167, gnl|dasNov1|scaffold_595 (42932-42748) | |
| 58-167, gnl|galGal2|chr1 (78677048-78676890) | |
| 58-167, gnl|hg17|chr3 (101391434-101391617) | |
| 58-167, gnl|Hg17|chr3 (101391473-101391582) | |
| 58-167, gnl|mm7|chr16 (57142223-57142046) | |
| 58-167, gnl|Mm7|chr16 (57142182-57142073) | |
| 58-167, gnl|monDom2|scaffold_50 (10535213-10535032) | |
| 58-167, gnl|oryCun1|scaffold_143525 (489-672) | |
| 58-167, gnl|panTro1|chr2 (102625650-102625833) | |
| 58-167, gnl|rheMac2|chr2 (20397361-20397545) | |
| 58-167, gnl|rn3|chr11 (44138200-44138378) | |
| 170-273, gnl|bosTau2|chr1 (23950411-23950514) | |
| 170-273, gnl|canFam2|chr33 (9803550-9803653) | |
| 170-273, gnl|danRer3|chr9 (28745573-28745674) | |
| 170-273, gnl|echTel1|scaffold_208879 (492-576) | |
| 170-273, gnl|fr1|chrUn (191371519-191371416) | |
| 170-273, gnl|galGal2|chr1 (78675667-78675565) | |
| 170-273, gnl|hg17|chr3 (101395510-101395613) | |
| 170-273, gnl|Hg17|chr3 (101395511-101395614) | |
| 170-273, gnl|loxAfr1|scaffold_24244 (6355-6439) | |
| 170-273, gnl|mm7|chr16 (57138467-57138364) | |
| 170-273, gnl|Mm7|chr16 (57138464-57138361) | |
| 170-273, gnl|monDom2|scaffold_50 (10524252-10524150) | |
| 170-273, gnl|oryCun1|scaffold_143525 (4276-4379) | |
| 170-273, gnl|panTro1|chr2 (102629665-102629768) | |
| 170-273, gnl|rheMac2|chr2 (20401490-20401593) | |
| 170-273, gnl|rn3|chr11 (44140972-44141075) | |
| 170-273, gnl|tetNig1|chr2 (8447553-8447451) | |
| 360-502, gnl|bosTau2|chr1 (23952258-23952400) | |
| 360-502, gnl|Hg17|chr3 (101397219-101397361) | |
| 360-502, gnl|Mm7|chr16 (57136974-57136832) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 58-167, gnl|bosTau2|chr1 (23943002-23943111) | |
| 58-167, gnl|canFam2|chr33 (9796134-9796320) | |
| 58-167, gnl|dasNov1|scaffold_595 (42932-42748) | |
| 58-167, gnl|galGal2|chr1 (78677048-78676890) | |
| 58-167, gnl|hg17|chr3 (101391434-101391617) | |
| 58-167, gnl|Hg17|chr3 (101391473-101391582) | |
| 58-167, gnl|mm7|chr16 (57142223-57142046) | |
| 58-167, gnl|Mm7|chr16 (57142182-57142073) | |
| 58-167, gnl|monDom2|scaffold_50 (10535213-10535032) | |
| 58-167, gnl|oryCun1|scaffold_143525 (489-672) | |
| 58-167, gnl|panTro1|chr2 (102625650-102625833) | |
| 58-167, gnl|rheMac2|chr2 (20397361-20397545) | |
| 58-167, gnl|rn3|chr11 (44138200-44138378) | |
| 170-273, gnl|bosTau2|chr1 (23950411-23950514) | |
| 170-273, gnl|canFam2|chr33 (9803550-9803653) | |
| 170-273, gnl|danRer3|chr9 (28745573-28745674) | |
| 170-273, gnl|echTel1|scaffold_208879 (492-576) | |
| 170-273, gnl|fr1|chrUn (191371519-191371416) | |
| 170-273, gnl|galGal2|chr1 (78675667-78675565) | |
| 170-273, gnl|hg17|chr3 (101395510-101395613) | |
| 170-273, gnl|Hg17|chr3 (101395511-101395614) | |
| 170-273, gnl|loxAfr1|scaffold_24244 (6355-6439) | |
| 170-273, gnl|mm7|chr16 (57138467-57138364) | |
| 170-273, gnl|Mm7|chr16 (57138464-57138361) | |
| 170-273, gnl|monDom2|scaffold_50 (10524252-10524150) | |
| 170-273, gnl|oryCun1|scaffold_143525 (4276-4379) | |
| 170-273, gnl|panTro1|chr2 (102629665-102629768) | |
| 170-273, gnl|rheMac2|chr2 (20401490-20401593) | |
| 170-273, gnl|rn3|chr11 (44140972-44141075) | |
| 170-273, gnl|tetNig1|chr2 (8447553-8447451) | |
| 360-502, gnl|bosTau2|chr1 (23952258-23952400) | |
| 360-502, gnl|Hg17|chr3 (101397219-101397361) | |
| 360-502, gnl|Mm7|chr16 (57136974-57136832) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) |