Non-Coding RNA Search

Ss1.1-Pig2-6L05.5

Sequence:


               
               AAAAACAAAAATTAGCACTGGCTTAGAAAGNAATTCATAAATCATTCTCACGTGGAAACC
AATCCCCTATTCTGAAAAGTCTCT------------AGAAAACCCAAGTGGGTTGACACA
CGTATTAGAATGGATGGAATGGTTCATTTTCAACACGTTTTGGGATTTCTTTTTTCATTT
TAAATTTTCAGTTGAGAACATCTTTTATGACAGAAATCCTATGCAGCCCATGGATGGCGT
TTGACAAGAACAAGGAGCTCAGTGATGTAAGTTCAGTGATAATCAGGATTCAGTATTCAA
TGGCAACAGGTTAATCAATACACAAAGAGAAAGCAGAGGGGAACTAAAAAGGCAAAATGA
GTGTCCGATTTCCCGGCCTGCGCAGCTCGCGTGGAAAGGGCAGGGCAGAGTGGCAGGAGC
CAGGAGCTGGGGTCAGGTCTGGGAACAGAGGCTCTGTGGGATGGCGGGCAGGCGAGAATC
CAGAACAGGCCATGCCACTCCCTTCTAGTGCCAAACACCATCCAGCCAGGACTGACCAGG
AAGCTCTGACCGGCTGGGTTTGAGTGGCGCGAGCCCCACCAAAGCAGAAGAGAGCACGAA
CAATCAAGTTCTCCACTGTGTAGCTGCCCTCCCCCATCCAAGATCAAAGTGATGGGTCTT
ATAGAGGCTTTGGGACACGTTGTAGTAAGTCTGAGCAGACAGCTGCCGTGAGCATGCTAT
GAGAAAACCCTTCCGAACTGACTGAGGGCTTTACCACTAGATCCAGCTAAGATCTGTATT
CGAATCACGTGTAAAGCTTCTGGGTTTTAAATACCTCCGTCCAGCAAGTAAACGTTCCCC
ACTTTCTGTTCCCAGTGTCCTTGGTCATGGTGCTTTTTGTTGCATTAAAAGTGCCGGTCA
AACTTTGATAGTATTTTTTTATAGTTGGTGCAGAGTGGAATAACTCATGGATTATTTCAA
TATTTTTGTAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAACAAAAATTAGCACTGGCTTAGAAAGNAATTCATAAATCATTCTCACGTGGAAACC
AATCCCCTATTCTGAAAAGTCTCT------------AGAAAACCCAAGTGGGTTGACACA
CGTATTAGAATGGATGGAATGGTTCATTTTCAACACGTTTTGGGATTTCTTTTTTCATTT
TAAATTTTCAGTTGAGAACATCTTTTATGACAGAAATCCTATGCAGCCCATGGATGGCGT
TTGACAAGAACAAGGAGCTCAGTGATGTAAGTTCAGTGATAATCAGGATTCAGTATTCAA
TGGCAACAGGTTAATCAATACACAAAGAGAAAGCAGAGGGGAACTAAAAAGGCAAAATGA
GTGTCCGATTTCCCGGCCTGCGCAGCTCGCGTGGAAAGGGCAGGGCAGAGTGGCAGGAGC
CAGGAGCTGGGGTCAGGTCTGGGAACAGAGGCTCTGTGGGATGGCGGGCAGGCGAGAATC
CAGAACAGGCCATGCCACTCCCTTCTAGTGCCAAACACCATCCAGCCAGGACTGACCAGG
AAGCTCTGACCGGCTGGGTTTGAGTGGCGCGAGCCCCACCAAAGCAGAAGAGAGCACGAA
CAATCAAGTTCTCCACTGTGTAGCTGCCCTCCCCCATCCAAGATCAAAGTGATGGGTCTT
ATAGAGGCTTTGGGACACGTTGTAGTAAGTCTGAGCAGACAGCTGCCGTGAGCATGCTAT
GAGAAAACCCTTCCGAACTGACTGAGGGCTTTACCACTAGATCCAGCTAAGATCTGTATT
CGAATCACGTGTAAAGCTTCTGGGTTTTAAATACCTCCGTCCAGCAAGTAAACGTTCCCC
ACTTTCTGTTCCCAGTGTCCTTGGTCATGGTGCTTTTTGTTGCATTAAAAGTGCCGGTCA
AACTTTGATAGTATTTTTTTATAGTTGGTGCAGAGTGGAATAACTCATGGATTATTTCAA
TATTTTTGTAAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-784, gnl|bosTau2|chr14 (12022770-12021990)
               

               
               3-784, gnl|Hg17|chr8 (56599848-56600656)
               

               
               3-784, gnl|Mm7|chr1 (3212336-3211488)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-784, gnl|bosTau2|chr14 (12022770-12021990)
               

               
               3-784, gnl|Hg17|chr8 (56599848-56600656)
               

               
               3-784, gnl|Mm7|chr1 (3212336-3211488)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fce (0.271592)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)

	3-784, gnl\|bosTau2\|chr14 (12022770-12021990)
	3-784, gnl\|Hg17\|chr8 (56599848-56600656)
	3-784, gnl\|Mm7\|chr1 (3212336-3211488)