Ss1.1-Pig2-70D20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTCCGGACAGAGCCATTAGGTACTGACCCTACTGGCAAAAACATTTACCTGCATGATAT TTGGCCTAGTCGAGAAGAAGTTCATCAGATAGAGGAAGAACATGTTGTATTATCCATGTT TAAAGCATTAAAAGAGAAAATAGAGATGGGAAATAAACGGTGGAATTCCTTAGAAGCACC GGATTCAGTTTTGTTTCCATGGGACTTAAAGTCTACTTATATCAGATGTCCTTCATTTTT TGATAAGCTTACCAAAGAGCCAGTTGCACTCCAGCCTATTGAAAATGCCCATGTCCTGTT GTATCTGGGAGATTCTGTCACAACAGATCACATATCACCTGCTGGAAGCATCGCAAGGAG TAGTGCTGCTGCTAAGTATTTGACAAACAGAGGCCTTACCCCTCGTGAATTCAATTCTTA TGGAGCCCGAAGAGGTAATGATGCTGTAATGACAAGAGGCACTTTTGCAAATATCAAGCT TTTTAATAAGTTCATTGGAAAACCAGCTCCCAAAACAATTCATTTTCCATCAGGACAGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTCCGGACAGAGCCATTAGGTACTGACCCTACTGGCAAAAACATTTACCTGCATGATAT TTGGCCTAGTCGAGAAGAAGTTCATCAGATAGAGGAAGAACATGTTGTATTATCCATGTT TAAAGCATTAAAAGAGAAAATAGAGATGGGAAATAAACGGTGGAATTCCTTAGAAGCACC GGATTCAGTTTTGTTTCCATGGGACTTAAAGTCTACTTATATCAGATGTCCTTCATTTTT TGATAAGCTTACCAAAGAGCCAGTTGCACTCCAGCCTATTGAAAATGCCCATGTCCTGTT GTATCTGGGAGATTCTGTCACAACAGATCACATATCACCTGCTGGAAGCATCGCAAGGAG TAGTGCTGCTGCTAAGTATTTGACAAACAGAGGCCTTACCCCTCGTGAATTCAATTCTTA TGGAGCCCGAAGAGGTAATGATGCTGTAATGACAAGAGGCACTTTTGCAAATATCAAGCT TTTTAATAAGTTCATTGGAAAACCAGCTCCCAAAACAATTCATTTTCCATCAGGACAGAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 19-145, gnl|bosTau2|chr21 (20391855-20391729) | |
| 19-145, gnl|Hg17|chr15 (76568042-76568168) | |
| 19-145, gnl|Mm7|chr9 (54929782-54929908) | |
| 393-540, gnl|bosTau2|chr21 (20387041-20386894) | |
| 393-540, gnl|canFam2|chr13 (41449980-41449809) | |
| 393-540, gnl|danRer3|chr25 (5018155-5017978) | |
| 393-540, gnl|dasNov1|scaffold_54279 (3344-3516) | |
| 393-540, gnl|echTel1|scaffold_122540 (582-746) | |
| 393-540, gnl|fr1|chrUn (14317420-14317589) | |
| 393-540, gnl|galGal2|chr10 (4453025-4452853) | |
| 393-540, gnl|hg17|chr15 (76573297-76573469) | |
| 393-540, gnl|Hg17|chr15 (76573305-76573452) | |
| 393-540, gnl|loxAfr1|scaffold_13138 (28053-28211) | |
| 393-540, gnl|mm7|chr9 (54935863-54936034) | |
| 393-540, gnl|Mm7|chr9 (54935870-54936017) | |
| 393-540, gnl|monDom2|scaffold_41 (16974678-16974851) | |
| 393-540, gnl|oryCun1|scaffold_178725 (12343-12172) | |
| 393-540, gnl|panTro1|chr16 (77230393-77230565) | |
| 393-540, gnl|rheMac2|chr7 (57528470-57528642) | |
| 393-540, gnl|rn3|chr8 (58492536-58492706) | |
| 393-540, gnl|tetNig1|chr13 (8016194-8016024) | |
| 393-540, gnl|xenTro1|scaffold_62 (1715665-1715827) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 19-145, gnl|bosTau2|chr21 (20391855-20391729) | |
| 19-145, gnl|Hg17|chr15 (76568042-76568168) | |
| 19-145, gnl|Mm7|chr9 (54929782-54929908) | |
| 393-540, gnl|bosTau2|chr21 (20387041-20386894) | |
| 393-540, gnl|canFam2|chr13 (41449980-41449809) | |
| 393-540, gnl|danRer3|chr25 (5018155-5017978) | |
| 393-540, gnl|dasNov1|scaffold_54279 (3344-3516) | |
| 393-540, gnl|echTel1|scaffold_122540 (582-746) | |
| 393-540, gnl|fr1|chrUn (14317420-14317589) | |
| 393-540, gnl|galGal2|chr10 (4453025-4452853) | |
| 393-540, gnl|hg17|chr15 (76573297-76573469) | |
| 393-540, gnl|Hg17|chr15 (76573305-76573452) | |
| 393-540, gnl|loxAfr1|scaffold_13138 (28053-28211) | |
| 393-540, gnl|mm7|chr9 (54935863-54936034) | |
| 393-540, gnl|Mm7|chr9 (54935870-54936017) | |
| 393-540, gnl|monDom2|scaffold_41 (16974678-16974851) | |
| 393-540, gnl|oryCun1|scaffold_178725 (12343-12172) | |
| 393-540, gnl|panTro1|chr16 (77230393-77230565) | |
| 393-540, gnl|rheMac2|chr7 (57528470-57528642) | |
| 393-540, gnl|rn3|chr8 (58492536-58492706) | |
| 393-540, gnl|tetNig1|chr13 (8016194-8016024) | |
| 393-540, gnl|xenTro1|scaffold_62 (1715665-1715827) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nca (0.136874) | |
| kid (0.129735) |