Non-Coding RNA Search

Ss1.1-Pig2-70K13.5

Sequence:


               
               CGCCGTATCCTCTGAAGCAGGTGAGGGTCCCCATTGTGGAAAACAGCGAATGCGACATGC
AGTACCACCTCGGCCTGTCCACAGGGGACAACATCCCGATTGTCCGCGACGACATGCTGT
GCGCCGGCAGCGAAGGGCACGACTCCTGCCAGGGTGACTCCGGGGGGCCCCTGGTCTGCA
GGGTGAATGGCACCTGGCTGCAGGCGGGCGTGGTCAGCTGGGGCGAGGGCTGCGCTCTGC
CCAACCGGCCTGGCATCTACACCCGCGTCACCCACTACTTGGACTGGATCCACCCTGAGT
CCCCCTCCCACCGAGTGCCCCCTGCCCTGAGCCCCCCCCCTTGCCCTGCTCCTGCCCCCA
TCTCGTCCCAGGCTGCCGAGGTGGAGCACGATCACTCATTAAAGAGCATGGAAAGCAAAA
AAAAAAAAAAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCCGTATCCTCTGAAGCAGGTGAGGGTCCCCATTGTGGAAAACAGCGAATGCGACATGC
AGTACCACCTCGGCCTGTCCACAGGGGACAACATCCCGATTGTCCGCGACGACATGCTGT
GCGCCGGCAGCGAAGGGCACGACTCCTGCCAGGGTGACTCCGGGGGGCCCCTGGTCTGCA
GGGTGAATGGCACCTGGCTGCAGGCGGGCGTGGTCAGCTGGGGCGAGGGCTGCGCTCTGC
CCAACCGGCCTGGCATCTACACCCGCGTCACCCACTACTTGGACTGGATCCACCCTGAGT
CCCCCTCCCACCGAGTGCCCCCTGCCCTGAGCCCCCCCCCTTGCCCTGCTCCTGCCCCCA
TCTCGTCCCAGGCTGCCGAGGTGGAGCACGATCACTCATTAAAGAGCATGGAAAGCAAAA
AAAAAAAAAAGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|4336615|gb|AAD17858.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|4336615|gb|AAD17858.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               150-339, gnl|bosTau2|chr25 (810308-810497)
               

               
               150-339, gnl|Hg17|chr16 (1218818-1218630)
               

               
               150-339, gnl|Mm7|chr17 (23550770-23550946)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               150-339, gnl|bosTau2|chr25 (810308-810497)
               

               
               150-339, gnl|Hg17|chr16 (1218818-1218630)
               

               
               150-339, gnl|Mm7|chr17 (23550770-23550946)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cag (0.151194)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cag (0.151194)

	150-339, gnl\|bosTau2\|chr25 (810308-810497)
	150-339, gnl\|Hg17\|chr16 (1218818-1218630)
	150-339, gnl\|Mm7\|chr17 (23550770-23550946)