Non-Coding RNA Search

Ss1.1-Pig2-70L09.5

Sequence:


               
               GCGGACTTGACGTCCCCGTCGGGGCTCGATGGCCAGCCCCAGGGTGACCCCGCCGGCCAG
GGCCTTCTTGAGGCTCTCCTTGACCTCCGTCAGCTCCAGCTCCAGGCTGACGCGCTCCGC
CTCCTTCTGCTTGCACTCCTCCTCCAGCTTCTTCAGCTTCTCCTCCAGGATGGTCTGCGT
CTTCCGGCCTGCGTTCACCTCGATGGCCGCCCTCAGGCCCTTCCTCTCCTTCCGGAGCTG
GGCCAGCCGGTCCCGCAGGCCCTCCCTCCTCCTCAGCAGCTCCTCCTCTTTGGCCTGCAG
CCGCTTGGCATCTGCTTCCACCCGGTTCTTGCCATATTTGTACTGGTCAGCGTTTGAAGG
CGTCCGCTTCACGCCGGCTGCTGAATCGGCTTTTTTTTGCTGCGCGCTCAGAGCCTTGCC
TTTCCCCGTAATCCCATTCGAGGCCACAGGGGGCTTTTTACTCTTCAACTGGGCGCCGAG
CCCGAGAGATGCCCTCCCCAGAGAAGAGGTGTTAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGACTTGACGTCCCCGTCGGGGCTCGATGGCCAGCCCCAGGGTGACCCCGCCGGCCAG
GGCCTTCTTGAGGCTCTCCTTGACCTCCGTCAGCTCCAGCTCCAGGCTGACGCGCTCCGC
CTCCTTCTGCTTGCACTCCTCCTCCAGCTTCTTCAGCTTCTCCTCCAGGATGGTCTGCGT
CTTCCGGCCTGCGTTCACCTCGATGGCCGCCCTCAGGCCCTTCCTCTCCTTCCGGAGCTG
GGCCAGCCGGTCCCGCAGGCCCTCCCTCCTCCTCAGCAGCTCCTCCTCTTTGGCCTGCAG
CCGCTTGGCATCTGCTTCCACCCGGTTCTTGCCATATTTGTACTGGTCAGCGTTTGAAGG
CGTCCGCTTCACGCCGGCTGCTGAATCGGCTTTTTTTTGCTGCGCGCTCAGAGCCTTGCC
TTTCCCCGTAATCCCATTCGAGGCCACAGGGGGCTTTTTACTCTTCAACTGGGCGCCGAG
CCCGAGAGATGCCCTCCCCAGAGAAGAGGTGTTAGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-191, gnl|bosTau2|chr6 (68696897-68697086)
               

               
               3-191, gnl|Hg17|chr4 (7892622-7892811)
               

               
               3-191, gnl|Mm7|chr5 (35058537-35058348)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-191, gnl|bosTau2|chr6 (68696897-68697086)
               

               
               3-191, gnl|Hg17|chr4 (7892622-7892811)
               

               
               3-191, gnl|Mm7|chr5 (35058537-35058348)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	3-191, gnl\|bosTau2\|chr6 (68696897-68697086)
	3-191, gnl\|Hg17\|chr4 (7892622-7892811)
	3-191, gnl\|Mm7\|chr5 (35058537-35058348)