Ss1.1-Pig2-71L09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGAATGATGTGAACTACAAGAGGGGCTCTGCAGGGGCCACAGATAATGAAAAAAGCCCG GAGAGCCAAGGGTCAGCCCCAACCTTCAAGGAAAAGCTACGTGATCTCCGTGTGGCAGAG GGTGAGAAGCTGCTGCTCCAGTGCCAGGTATCCTCCGACCCCCCGGCCACCATCACCTGG ACACTGAATGGGAAGACACTCAAGACCACCAAGTTCATTGTCCTCTCCCAAGAAGGCTCA CTGTGCTCCATCTCCATCGAGAAGGCCTTGCCCGAGGACAGAGGTTTGTACAAGTGTGTG GCCAAGAACAGCGCCGGCCAGGCTGAGTGCTCCTGCCAAGTCACCGTGGACGATGCCCCC ACCGGAGAGAATGCCAAGGCCCCGGAGATGAAAGCCCGGAGGCCAAAGAGCTCTCTTCCT CCTGTGCTAGGAACAGAGAGTGATGCCACTGTGAAAAAGAAACCTGCCCCCAAGACACCT CCGAAGGCAGCCATGCCCCCTCAGATCATCCAGTTTCCCGAGGACCAAAAGGTGCGAGCG GGAAAGTCTGTGGAGCTGTTTGGTAAAGTGGCCGGTACCCAGCCCATCACCTGTACCTGG ATGAAGTTCCGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGAATGATGTGAACTACAAGAGGGGCTCTGCAGGGGCCACAGATAATGAAAAAAGCCCG GAGAGCCAAGGGTCAGCCCCAACCTTCAAGGAAAAGCTACGTGATCTCCGTGTGGCAGAG GGTGAGAAGCTGCTGCTCCAGTGCCAGGTATCCTCCGACCCCCCGGCCACCATCACCTGG ACACTGAATGGGAAGACACTCAAGACCACCAAGTTCATTGTCCTCTCCCAAGAAGGCTCA CTGTGCTCCATCTCCATCGAGAAGGCCTTGCCCGAGGACAGAGGTTTGTACAAGTGTGTG GCCAAGAACAGCGCCGGCCAGGCTGAGTGCTCCTGCCAAGTCACCGTGGACGATGCCCCC ACCGGAGAGAATGCCAAGGCCCCGGAGATGAAAGCCCGGAGGCCAAAGAGCTCTCTTCCT CCTGTGCTAGGAACAGAGAGTGATGCCACTGTGAAAAAGAAACCTGCCCCCAAGACACCT CCGAAGGCAGCCATGCCCCCTCAGATCATCCAGTTTCCCGAGGACCAAAAGGTGCGAGCG GGAAAGTCTGTGGAGCTGTTTGGTAAAGTGGCCGGTACCCAGCCCATCACCTGTACCTGG ATGAAGTTCCGA |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 1-236, gnl|bosTau2|chr1 (41591370-41591605) | |
| 1-236, gnl|canFam2|chr33 (29786257-29786450) | |
| 1-236, gnl|danRer3|chrUn (143840058-143839889) | |
| 1-236, gnl|dasNov1|scaffold_10155 (31080-30884) | |
| 1-236, gnl|echTel1|scaffold_324818 (85303-85114) | |
| 1-236, gnl|fr1|chrUn (309623622-309623421) | |
| 1-236, gnl|galGal2|chr7 (27929522-27929693) | |
| 1-236, gnl|hg17|chr3 (75460356-75460558) | |
| 1-236, gnl|Hg17|chr3 (124901791-124901556) | |
| 1-236, gnl|loxAfr1|scaffold_21839 (15626-15433) | |
| 1-236, gnl|mm7|chr16 (34597463-34597268) | |
| 1-236, gnl|Mm7|chr16 (34597194-34597429) | |
| 1-236, gnl|monDom2|scaffold_24 (21891683-21891878) | |
| 1-236, gnl|oryCun1|scaffold_159119 (9630-9437) | |
| 1-236, gnl|panTro1|chr2 (77492119-77492328) | |
| 1-236, gnl|rheMac2|chr2 (43692110-43692306) | |
| 1-236, gnl|rn3|chr11 (67745992-67746187) | |
| 1-236, gnl|tetNig1|chrUn_random (104422128-104421955) | |
| 1-236, gnl|xenTro1|scaffold_398 (117329-117518) | |
| 488-612, gnl|bosTau2|chr1 (41624663-41624787) | |
| 488-612, gnl|canFam2|chr33 (29752817-29752972) | |
| 488-612, gnl|danRer3|chrUn (143873730-143873580) | |
| 488-612, gnl|dasNov1|scaffold_2635 (49092-49247) | |
| 488-612, gnl|echTel1|scaffold_181997 (981-1136) | |
| 488-612, gnl|fr1|chrUn (309627034-309626881) | |
| 488-612, gnl|hg17|chr3 (124867752-124867906) | |
| 488-612, gnl|Hg17|chr3 (124867886-124867762) | |
| 488-612, gnl|loxAfr1|scaffold_200089 (379-534) | |
| 488-612, gnl|mm7|chr16 (34628480-34628325) | |
| 488-612, gnl|Mm7|chr16 (34628344-34628468) | |
| 488-612, gnl|monDom2|scaffold_24 (21838594-21838746) | |
| 488-612, gnl|panTro1|chr2 (126580775-126580929) | |
| 488-612, gnl|rheMac2|chr2 (43658839-43658993) | |
| 488-612, gnl|rn3|chr11 (67715162-67715316) | |
| 488-612, gnl|xenTro1|scaffold_398 (164438-164595) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-236, gnl|bosTau2|chr1 (41591370-41591605) | |
| 1-236, gnl|canFam2|chr33 (29786257-29786450) | |
| 1-236, gnl|danRer3|chrUn (143840058-143839889) | |
| 1-236, gnl|dasNov1|scaffold_10155 (31080-30884) | |
| 1-236, gnl|echTel1|scaffold_324818 (85303-85114) | |
| 1-236, gnl|fr1|chrUn (309623622-309623421) | |
| 1-236, gnl|galGal2|chr7 (27929522-27929693) | |
| 1-236, gnl|hg17|chr3 (75460356-75460558) | |
| 1-236, gnl|Hg17|chr3 (124901791-124901556) | |
| 1-236, gnl|loxAfr1|scaffold_21839 (15626-15433) | |
| 1-236, gnl|mm7|chr16 (34597463-34597268) | |
| 1-236, gnl|Mm7|chr16 (34597194-34597429) | |
| 1-236, gnl|monDom2|scaffold_24 (21891683-21891878) | |
| 1-236, gnl|oryCun1|scaffold_159119 (9630-9437) | |
| 1-236, gnl|panTro1|chr2 (77492119-77492328) | |
| 1-236, gnl|rheMac2|chr2 (43692110-43692306) | |
| 1-236, gnl|rn3|chr11 (67745992-67746187) | |
| 1-236, gnl|tetNig1|chrUn_random (104422128-104421955) | |
| 1-236, gnl|xenTro1|scaffold_398 (117329-117518) | |
| 488-612, gnl|bosTau2|chr1 (41624663-41624787) | |
| 488-612, gnl|canFam2|chr33 (29752817-29752972) | |
| 488-612, gnl|danRer3|chrUn (143873730-143873580) | |
| 488-612, gnl|dasNov1|scaffold_2635 (49092-49247) | |
| 488-612, gnl|echTel1|scaffold_181997 (981-1136) | |
| 488-612, gnl|fr1|chrUn (309627034-309626881) | |
| 488-612, gnl|hg17|chr3 (124867752-124867906) | |
| 488-612, gnl|Hg17|chr3 (124867886-124867762) | |
| 488-612, gnl|loxAfr1|scaffold_200089 (379-534) | |
| 488-612, gnl|mm7|chr16 (34628480-34628325) | |
| 488-612, gnl|Mm7|chr16 (34628344-34628468) | |
| 488-612, gnl|monDom2|scaffold_24 (21838594-21838746) | |
| 488-612, gnl|panTro1|chr2 (126580775-126580929) | |
| 488-612, gnl|rheMac2|chr2 (43658839-43658993) | |
| 488-612, gnl|rn3|chr11 (67715162-67715316) | |
| 488-612, gnl|xenTro1|scaffold_398 (164438-164595) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eje (0.0988338) |