Ss1.1-Pig2-72B12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAGCCCTGAGGGGAGCCCAGGCCTTGGCTGAAAACATCGACTGCCACGTCTTCCCCTTCT CCCACTTTGGCAAGAGCTTCATCAAACGCTGCCACCTGTCTTCAGACAGCTTCATCCAGA CGGCCTTGCAGCTGGCCCACTTCCGGGACAGGGGTCGATTCTGCCTGACCTATGAGTCAG CCATGACTCGCCTGTTCCTGGAAGGCCGGACAGAGACGGTGCGTTCTTGCACGAGGGAGG CCTGCAGCTTTGTGAGAGCCATGGAACACCAAGAGAAGACAGACCCACAGTGCCTCGCCC TGTTCCGCCTGGCGGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCGATGAGCGGCCAGG GGGTCGACCGCCACCTCTTTGCTCTCTACATCGTGTCGCAATTCCTCCGCCTACAGTCGC CCTTCCTGGACCAGGTTCACTCGGAGCAGTGGCAGCTGGCCACCAGCCAGATTCCTGTTC AGCAAATGCACCTGTTTGACATCCACAACTATCCGGACTACGTTTCCTCTGGTGGTGGAT TTGGGCCTGCCGATGAGCATGGCTATGGTGTTTCTTACATCTTCACTGGGGAGGACACGA TTACCTTCCACATCTCTAGCAAAAAATCAAGCACAAGAACGGACTCCCACCGGCTGGGCC AGCACATCAGGGATGCATTGCTGGACGTGGCAGCCCTATTCCAGGAGGGGCAGCATCTTA AGCGCCGGGCCTGAGGTTTGGGGGAGGACGTGGGCTCTCCCCTGCCACACAAGGGGCTCC AGGGCCCCCGCAACAACCACTGACTCTTGACACCTTCCAGAGGGGAGTGGGTCTCTCCAG GAACTAGGGGGCAGGTCTCTACAGCTGGGCTGGTGCAGGACGGAGGCAGCCCGTTCGGGT TTGGAAAGCTGGCACCTGGTCTAATAAAGATGTGTGAGCTGGGAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAGCCCTGAGGGGAGCCCAGGCCTTGGCTGAAAACATCGACTGCCACGTCTTCCCCTTCT CCCACTTTGGCAAGAGCTTCATCAAACGCTGCCACCTGTCTTCAGACAGCTTCATCCAGA CGGCCTTGCAGCTGGCCCACTTCCGGGACAGGGGTCGATTCTGCCTGACCTATGAGTCAG CCATGACTCGCCTGTTCCTGGAAGGCCGGACAGAGACGGTGCGTTCTTGCACGAGGGAGG CCTGCAGCTTTGTGAGAGCCATGGAACACCAAGAGAAGACAGACCCACAGTGCCTCGCCC TGTTCCGCCTGGCGGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCGATGAGCGGCCAGG GGGTCGACCGCCACCTCTTTGCTCTCTACATCGTGTCGCAATTCCTCCGCCTACAGTCGC CCTTCCTGGACCAGGTTCACTCGGAGCAGTGGCAGCTGGCCACCAGCCAGATTCCTGTTC AGCAAATGCACCTGTTTGACATCCACAACTATCCGGACTACGTTTCCTCTGGTGGTGGAT TTGGGCCTGCCGATGAGCATGGCTATGGTGTTTCTTACATCTTCACTGGGGAGGACACGA TTACCTTCCACATCTCTAGCAAAAAATCAAGCACAAGAACGGACTCCCACCGGCTGGGCC AGCACATCAGGGATGCATTGCTGGACGTGGCAGCCCTATTCCAGGAGGGGCAGCATCTTA AGCGCCGGGCCTGAGGTTTGGGGGAGGACGTGGGCTCTCCCCTGCCACACAAGGGGCTCC AGGGCCCCCGCAACAACCACTGACTCTTGACACCTTCCAGAGGGGAGTGGGTCTCTCCAG GAACTAGGGGGCAGGTCTCTACAGCTGGGCTGGTGCAGGACGGAGGCAGCCCGTTCGGGT TTGGAAAGCTGGCACCTGGTCTAATAAAGATGTGTGAGCTGGGAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 1-151, gnl|bosTau2|chr18 (48793491-48793641) | |
| 1-151, gnl|Hg17|chr19 (54905408-54905558) | |
| 1-151, gnl|Mm7|chr7 (41138019-41137869) | |
| 282-437, gnl|bosTau2|chr18 (48794629-48794784) | |
| 282-437, gnl|canFam2|chr1 (109716000-109715839) | |
| 282-437, gnl|danRer3|chr3 (27797113-27797264) | |
| 282-437, gnl|echTel1|scaffold_270631 (2634-2791) | |
| 282-437, gnl|fr1|chrUn (73507172-73507332) | |
| 282-437, gnl|hg17|chr19 (54906879-54907040) | |
| 282-437, gnl|Hg17|chr19 (54906878-54907033) | |
| 282-437, gnl|loxAfr1|scaffold_60225 (7451-7602) | |
| 282-437, gnl|mm7|chr7 (41136639-41136485) | |
| 282-437, gnl|Mm7|chr7 (41136638-41136484) | |
| 282-437, gnl|rheMac2|chr10 (94596147-94596008) | |
| 282-437, gnl|rn3|chr1 (95512508-95512354) | |
| 282-437, gnl|tetNig1|chr13 (4120360-4120517) | |
| 755-943, gnl|bosTau2|chr18 (48795964-48796152) | |
| 755-943, gnl|canFam2|chr1 (109714594-109714399) | |
| 755-943, gnl|dasNov1|scaffold_66267 (5131-4942) | |
| 755-943, gnl|hg17|chr19 (54908613-54908801) | |
| 755-943, gnl|Hg17|chr19 (54908619-54908800) | |
| 755-943, gnl|mm7|chr7 (41135290-41135109) | |
| 755-943, gnl|Mm7|chr7 (41135282-41135109) | |
| 755-943, gnl|panTro1|chr20_random (25458694-25458506) | |
| 755-943, gnl|rheMac2|chr19 (55988704-55988893) | |
| 755-943, gnl|rn3|chr1 (95511259-95511078) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-151, gnl|bosTau2|chr18 (48793491-48793641) | |
| 1-151, gnl|Hg17|chr19 (54905408-54905558) | |
| 1-151, gnl|Mm7|chr7 (41138019-41137869) | |
| 282-437, gnl|bosTau2|chr18 (48794629-48794784) | |
| 282-437, gnl|canFam2|chr1 (109716000-109715839) | |
| 282-437, gnl|danRer3|chr3 (27797113-27797264) | |
| 282-437, gnl|echTel1|scaffold_270631 (2634-2791) | |
| 282-437, gnl|fr1|chrUn (73507172-73507332) | |
| 282-437, gnl|hg17|chr19 (54906879-54907040) | |
| 282-437, gnl|Hg17|chr19 (54906878-54907033) | |
| 282-437, gnl|loxAfr1|scaffold_60225 (7451-7602) | |
| 282-437, gnl|mm7|chr7 (41136639-41136485) | |
| 282-437, gnl|Mm7|chr7 (41136638-41136484) | |
| 282-437, gnl|rheMac2|chr10 (94596147-94596008) | |
| 282-437, gnl|rn3|chr1 (95512508-95512354) | |
| 282-437, gnl|tetNig1|chr13 (4120360-4120517) | |
| 755-943, gnl|bosTau2|chr18 (48795964-48796152) | |
| 755-943, gnl|canFam2|chr1 (109714594-109714399) | |
| 755-943, gnl|dasNov1|scaffold_66267 (5131-4942) | |
| 755-943, gnl|hg17|chr19 (54908613-54908801) | |
| 755-943, gnl|Hg17|chr19 (54908619-54908800) | |
| 755-943, gnl|mm7|chr7 (41135290-41135109) | |
| 755-943, gnl|Mm7|chr7 (41135282-41135109) | |
| 755-943, gnl|panTro1|chr20_random (25458694-25458506) | |
| 755-943, gnl|rheMac2|chr19 (55988704-55988893) | |
| 755-943, gnl|rn3|chr1 (95511259-95511078) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) | |
| ebs (0.118301) | |
| ecc (0.115035) |