Non-Coding RNA Search

Ss1.1-Pig2-73A05.5

Sequence:


               
               ACAAGCCTGCTTCACCCACAGTGCTCTGTCAGGGGACCTCTGCCATCCCAGCCCAGTGGC
TGCCTGGCTCCTCTACCATCAGCTGCATACATCGGGCCACCAGGGACAATGGGGGTATCT
CTCCTCCCACAGGCCATGTCCCCCGATGGAGAGGCCATAGTCACTGGTGCTGGAGATGAA
ACCCTGAGGTTCTGGAATGTCTTTAGCAAAACCCGTTCAACAAAGGAATCCGTGTCTGTC
CTCAACCTCTTCACCAGGATCCGGTAAACCCGCGGCCTTGCTGTACTGGTCGCAGAATGT
CACCTCTCGTCAGCGTCATGGACCCTCCCCTCCCCCCAACACGGGCACCAAGGAAGGCAG
CAGGGGTGGGGGGAGCCGGGCCTGGAGAGACCCTGAAGATTCTATTAAAGCCTGATTGCG
GAACCCTGTCAGCCGGTGTTTGGGGTGGGACTGTGGTCGGGCACCAACAGGAGTAGGGGC
TCCAGCTCCCTCCACCCTGCATGGCCCCAGCTTGGACATCTGCTCGGAGCAGGATGGACG
TCTCCTGGGACCCTGCCTGCTTCCATCTGTGTCCGTCACCGCCACCACCTTGTTGGGGCA
GCATGCTCTTCCGGGAAGCACACGCTCACCACTGCCCACACCCGCTACGGGACAGACAGC
TGGACACCAGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAAGCCTGCTTCACCCACAGTGCTCTGTCAGGGGACCTCTGCCATCCCAGCCCAGTGGC
TGCCTGGCTCCTCTACCATCAGCTGCATACATCGGGCCACCAGGGACAATGGGGGTATCT
CTCCTCCCACAGGCCATGTCCCCCGATGGAGAGGCCATAGTCACTGGTGCTGGAGATGAA
ACCCTGAGGTTCTGGAATGTCTTTAGCAAAACCCGTTCAACAAAGGAATCCGTGTCTGTC
CTCAACCTCTTCACCAGGATCCGGTAAACCCGCGGCCTTGCTGTACTGGTCGCAGAATGT
CACCTCTCGTCAGCGTCATGGACCCTCCCCTCCCCCCAACACGGGCACCAAGGAAGGCAG
CAGGGGTGGGGGGAGCCGGGCCTGGAGAGACCCTGAAGATTCTATTAAAGCCTGATTGCG
GAACCCTGTCAGCCGGTGTTTGGGGTGGGACTGTGGTCGGGCACCAACAGGAGTAGGGGC
TCCAGCTCCCTCCACCCTGCATGGCCCCAGCTTGGACATCTGCTCGGAGCAGGATGGACG
TCTCCTGGGACCCTGCCTGCTTCCATCTGTGTCCGTCACCGCCACCACCTTGTTGGGGCA
GCATGCTCTTCCGGGAAGCACACGCTCACCACTGCCCACACCCGCTACGGGACAGACAGC
TGGACACCAGGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|3702288|gb|AAC62836.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|3702288|gb|AAC62836.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               224-672, gnl|bosTau2|chr7 (16310339-16310775)
               

               
               224-672, gnl|Hg17|chr19 (3485791-3486320)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               224-672, gnl|bosTau2|chr7 (16310339-16310775)
               

               
               224-672, gnl|Hg17|chr19 (3485791-3486320)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cag (0.151194)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cag (0.151194)
               

               
               ebs (0.118301)

	224-672, gnl\|bosTau2\|chr7 (16310339-16310775)
	224-672, gnl\|Hg17\|chr19 (3485791-3486320)