Ss1.1-Pig2-73J06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGAAGGAGGGAGCCACAAAGGAGGATTGGCATAAATCCAAAGATGATCATTACAACATG GATAGTGTACATCCTTGCCCGGAAACATACTGGGTTCCCCTTCCCACCGAAAGTCAGTTC AGATGTGGAAGTTGTGGAGAGTGAGGCTGTGTCTGTAGTACAGCACTGGTTGAAAAAGAC TGAAGAAGAGGCTTCCCAGGACATAAAGGAGAAGATGTCTGCCAGCTGTCCTCCCACACA TGGCCAAGATGTACATGTGACCAGAGATGTGGTGAAGCACCGCCTCTCAAAGTCTGGTTT GTTAACAAACCAGAGTCAAGAGGTCCTGGAAGAAAGAACAAGAATCCAGTTCATAAGATG GAGCCACACCCGTATCTTCCAAGTGCCGAGCGAGGTGAGAAATGAAGTCATGCGAGATAG GATAGAGCAAGTGAGACGAAGCATGTGCCATCTTACAGATGAGTCATCTCAGGAGCTTCG TGACAGAAATTCCTGCAAAGACTGCTGAGAGCAGCAGGGTCAAGGAGCAACCTGTGTCAG AGGATGTCCATTTCCCCCCTTGACCTGAGGAGTGACCACACCTGAGCAGAGAGAATCCAG CAGGTGAACCCTTCCTTGTGACAGTGGCAGCACTGGAATCTTCTTGCTGAATTGCTGATA AAGAGACGCACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGAAGGAGGGAGCCACAAAGGAGGATTGGCATAAATCCAAAGATGATCATTACAACATG GATAGTGTACATCCTTGCCCGGAAACATACTGGGTTCCCCTTCCCACCGAAAGTCAGTTC AGATGTGGAAGTTGTGGAGAGTGAGGCTGTGTCTGTAGTACAGCACTGGTTGAAAAAGAC TGAAGAAGAGGCTTCCCAGGACATAAAGGAGAAGATGTCTGCCAGCTGTCCTCCCACACA TGGCCAAGATGTACATGTGACCAGAGATGTGGTGAAGCACCGCCTCTCAAAGTCTGGTTT GTTAACAAACCAGAGTCAAGAGGTCCTGGAAGAAAGAACAAGAATCCAGTTCATAAGATG GAGCCACACCCGTATCTTCCAAGTGCCGAGCGAGGTGAGAAATGAAGTCATGCGAGATAG GATAGAGCAAGTGAGACGAAGCATGTGCCATCTTACAGATGAGTCATCTCAGGAGCTTCG TGACAGAAATTCCTGCAAAGACTGCTGAGAGCAGCAGGGTCAAGGAGCAACCTGTGTCAG AGGATGTCCATTTCCCCCCTTGACCTGAGGAGTGACCACACCTGAGCAGAGAGAATCCAG CAGGTGAACCCTTCCTTGTGACAGTGGCAGCACTGGAATCTTCTTGCTGAATTGCTGATA AAGAGACGCACT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 1-120, gnl|bosTau2|chr29 (27266277-27266396) | |
| 1-120, gnl|canFam2|chr5 (4356797-4356682) | |
| 1-120, gnl|dasNov1|scaffold_100060 (1787-1672) | |
| 1-120, gnl|echTel1|scaffold_320892 (6396-6511) | |
| 1-120, gnl|galGal2|chr24 (2363420-2363523) | |
| 1-120, gnl|hg17|chr11 (133220467-133220582) | |
| 1-120, gnl|Hg17|chr11 (133220594-133220475) | |
| 1-120, gnl|mm7|chr9 (27279029-27278917) | |
| 1-120, gnl|Mm7|chr9 (27278903-27279019) | |
| 1-120, gnl|monDom2|scaffold_15 (24509400-24509515) | |
| 1-120, gnl|oryCun1|scaffold_172986 (15230-15115) | |
| 1-120, gnl|panTro1|chr9 (135448260-135448375) | |
| 1-120, gnl|rheMac2|chr14 (131850813-131850928) | |
| 515-666, gnl|bosTau2|chr29 (27271630-27271779) | |
| 515-666, gnl|canFam2|chr5 (4361244-4361028) | |
| 515-666, gnl|dasNov1|scaffold_195187 (3845-4106) | |
| 515-666, gnl|echTel1|scaffold_320892 (755-981) | |
| 515-666, gnl|hg17|chr11 (133215711-133215959) | |
| 515-666, gnl|Hg17|chr11 (133215902-133215753) | |
| 515-666, gnl|loxAfr1|scaffold_56482 (9670-9415) | |
| 515-666, gnl|mm7|chr9 (27283811-27283563) | |
| 515-666, gnl|Mm7|chr9 (27283615-27283767) | |
| 515-666, gnl|monDom2|scaffold_15 (24500707-24500974) | |
| 515-666, gnl|oryCun1|scaffold_205280 (11274-11029) | |
| 515-666, gnl|panTro1|chr9 (135443505-135443753) | |
| 515-666, gnl|rheMac2|chr14 (131846058-131846306) | |
| 515-666, gnl|rn3|chr8 (27024523-27024274) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-120, gnl|bosTau2|chr29 (27266277-27266396) | |
| 1-120, gnl|canFam2|chr5 (4356797-4356682) | |
| 1-120, gnl|dasNov1|scaffold_100060 (1787-1672) | |
| 1-120, gnl|echTel1|scaffold_320892 (6396-6511) | |
| 1-120, gnl|galGal2|chr24 (2363420-2363523) | |
| 1-120, gnl|hg17|chr11 (133220467-133220582) | |
| 1-120, gnl|Hg17|chr11 (133220594-133220475) | |
| 1-120, gnl|mm7|chr9 (27279029-27278917) | |
| 1-120, gnl|Mm7|chr9 (27278903-27279019) | |
| 1-120, gnl|monDom2|scaffold_15 (24509400-24509515) | |
| 1-120, gnl|oryCun1|scaffold_172986 (15230-15115) | |
| 1-120, gnl|panTro1|chr9 (135448260-135448375) | |
| 1-120, gnl|rheMac2|chr14 (131850813-131850928) | |
| 515-666, gnl|bosTau2|chr29 (27271630-27271779) | |
| 515-666, gnl|canFam2|chr5 (4361244-4361028) | |
| 515-666, gnl|dasNov1|scaffold_195187 (3845-4106) | |
| 515-666, gnl|echTel1|scaffold_320892 (755-981) | |
| 515-666, gnl|hg17|chr11 (133215711-133215959) | |
| 515-666, gnl|Hg17|chr11 (133215902-133215753) | |
| 515-666, gnl|loxAfr1|scaffold_56482 (9670-9415) | |
| 515-666, gnl|mm7|chr9 (27283811-27283563) | |
| 515-666, gnl|Mm7|chr9 (27283615-27283767) | |
| 515-666, gnl|monDom2|scaffold_15 (24500707-24500974) | |
| 515-666, gnl|oryCun1|scaffold_205280 (11274-11029) | |
| 515-666, gnl|panTro1|chr9 (135443505-135443753) | |
| 515-666, gnl|rheMac2|chr14 (131846058-131846306) | |
| 515-666, gnl|rn3|chr8 (27024523-27024274) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (1.03907) | |
| cte (0.87822) |