Non-Coding RNA Search

Ss1.1-Pig2-73P24.5

Sequence:


               
               CGACACCCAAAATACGACAACATCGTCATGGGTGCTGGATTCTCTGGGCATGGGTTCAAG
CTGTCCCCCATGGTGGGGAAGATCCTGTATGAATTAAGCATGAAATTAACACCATCCTAC
GACTTGACACCTTTTTGAATCAGCCGTTTCCCCAGCTTGGGCAAAGCCCACCTGTGACCC
CCGCCCCGTGGCCAGCAGCCTCTCTTCTGTGCCCGGGAGTTGGGAATACATCCCTCTGCT
GGGAAAGACTTCTCAGAGGAAGGAAGTTGCTGTGAGATGTCATCCTTTTCTCCTGCCTCT
CTTCAACTTCCCATAAACACCAGCTGATTGAATTTACCTTCTTTCCCCAGCCAGCTCCCC
AACCCCACACTTTTTGCTTCAGAAGTTCAGTCAGATATTCTATAATCACAGCGTTGCAAG
GACCTTGGAGATGGATGTCTCAATAAGGAGGCTCAGAAGTCCAAAACAGGTGTTTAAATT
TTTTTTAATGGGACAATTTAAGAAATTTGGGATAAATTTAACTAAAGCTGCCCAGGGGAG
GGTAAACAAGATGATCTGTAGACCGCTAATGCCCTTGAAGTTCCTTTTCATAAAATTAGA
GCCACCATCTATTACAAACTTCCATAAAATTGGGCTCATCTTGGGTGCACAGTAAATGTT
TGTTGAGAAAAATGTGTTAAACAAATAGAAAAGTAAATGACTGCATTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGACACCCAAAATACGACAACATCGTCATGGGTGCTGGATTCTCTGGGCATGGGTTCAAG
CTGTCCCCCATGGTGGGGAAGATCCTGTATGAATTAAGCATGAAATTAACACCATCCTAC
GACTTGACACCTTTTTGAATCAGCCGTTTCCCCAGCTTGGGCAAAGCCCACCTGTGACCC
CCGCCCCGTGGCCAGCAGCCTCTCTTCTGTGCCCGGGAGTTGGGAATACATCCCTCTGCT
GGGAAAGACTTCTCAGAGGAAGGAAGTTGCTGTGAGATGTCATCCTTTTCTCCTGCCTCT
CTTCAACTTCCCATAAACACCAGCTGATTGAATTTACCTTCTTTCCCCAGCCAGCTCCCC
AACCCCACACTTTTTGCTTCAGAAGTTCAGTCAGATATTCTATAATCACAGCGTTGCAAG
GACCTTGGAGATGGATGTCTCAATAAGGAGGCTCAGAAGTCCAAAACAGGTGTTTAAATT
TTTTTTAATGGGACAATTTAAGAAATTTGGGATAAATTTAACTAAAGCTGCCCAGGGGAG
GGTAAACAAGATGATCTGTAGACCGCTAATGCCCTTGAAGTTCCTTTTCATAAAATTAGA
GCCACCATCTATTACAAACTTCCATAAAATTGGGCTCATCTTGGGTGCACAGTAAATGTT
TGTTGAGAAAAATGTGTTAAACAAATAGAAAAGTAAATGACTGCATTG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               40-708, gnl|bosTau2|chr19 (13960185-13960860)
               

               
               40-708, gnl|Hg17|chr17 (24407311-24408358)
               

               
               40-708, gnl|Mm7|chr11 (77962837-77962196)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               40-708, gnl|bosTau2|chr19 (13960185-13960860)
               

               
               40-708, gnl|Hg17|chr17 (24407311-24408358)
               

               
               40-708, gnl|Mm7|chr11 (77962837-77962196)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbe (0.239234)
               

               
               cli (0.152812)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)
               

               
               cli (0.152812)

	40-708, gnl\|bosTau2\|chr19 (13960185-13960860)
	40-708, gnl\|Hg17\|chr17 (24407311-24408358)
	40-708, gnl\|Mm7\|chr11 (77962837-77962196)